Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC090312.2-201ENST00000582687 378 ntBASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 AL162431.4-201ENST00000604674 411 ntBASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 AC080013.3-201ENST00000606839 578 ntBASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 AC055764.2-201ENST00000610089 670 ntBASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 AC126915.2-201ENST00000610957 190 ntBASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 AC105227.2-201ENST00000615075 605 ntBASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 CYP4F35P-202ENST00000636121 390 ntBASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 AC025263.3-201ENST00000622965 1396 ntBASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
PTCHD3Q3KNS1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 RPL23P2-201ENST00000320371 421 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 Y_RNA.192-201ENST00000363977 102 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 OR52E6-202ENST00000379946 954 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 RNU1-149P-201ENST00000390870 161 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 USP9YP31-201ENST00000431405 881 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 RPL21P110-201ENST00000433345 446 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 YWHAZP7-201ENST00000436906 631 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AC092393.1-201ENST00000439625 742 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 NOP56P2-201ENST00000447491 769 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AC079776.3-201ENST00000450665 370 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 RN7SL610P-201ENST00000463845 291 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AL161747.1-201ENST00000480068 358 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 OR5H4P-201ENST00000510851 923 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AC098976.1-201ENST00000513014 541 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AC108471.1-201ENST00000513977 287 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 LSM3P2-201ENST00000551246 273 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 MIR4660-201ENST00000583549 74 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AC010487.1-201ENST00000594408 1172 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 AC110760.3-201ENST00000598794 467 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 RPSAP73-201ENST00000614820 330 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 MIR6839-201ENST00000620425 113 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 MIR4278-201ENST00000636094 69 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 RBPJP2-201ENST00000618187 1444 ntBASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD3Q3KNS1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC053481.2-202ENST00000582394 1500 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 RNA5SP507-201ENST00000363603 121 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 SNORA67-201ENST00000384423 137 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 MIR105-1-201ENST00000385222 81 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC108075.1-201ENST00000424692 529 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 RPL21P43-201ENST00000425440 472 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 MTCO1P54-201ENST00000430139 712 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 MTCO3P21-201ENST00000430791 643 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 GAPDHP58-201ENST00000438477 1006 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 RPS11P7-201ENST00000442125 465 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 MTND5P2-201ENST00000442927 1142 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 HMGB1P16-201ENST00000447155 540 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 GAPDHP14-201ENST00000450472 937 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 OR52E3P-201ENST00000452083 936 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 DNAJB5P1-201ENST00000454004 806 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 RN7SL814P-201ENST00000487715 300 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 RN7SL808P-201ENST00000496066 299 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 AC098799.3-201ENST00000506095 438 ntBASIC5.13□□□□□ -1.59
PTCHD3Q3KNS1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms