Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC27Q2M243 SERPINE4P-201ENST00000554978 281 ntBASIC7.19□□□□□ -1.26
CCDC27Q2M243 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.19□□□□□ -1.26
CCDC27Q2M243 AC017100.2-201ENST00000584628 355 ntBASIC7.19□□□□□ -1.26
CCDC27Q2M243 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC27Q2M243 AL360012.1-201ENST00000602813 131 ntBASIC7.19□□□□□ -1.26
CCDC27Q2M243 AC064872.1-201ENST00000604823 1072 ntBASIC7.19□□□□□ -1.26
CCDC27Q2M243 MIR6862-1-201ENST00000613016 70 ntBASIC7.19□□□□□ -1.26
CCDC27Q2M243 MIR6862-2-201ENST00000614755 70 ntBASIC7.19□□□□□ -1.26
CCDC27Q2M243 AL122125.1-201ENST00000616999 600 ntBASIC7.19□□□□□ -1.26
CCDC27Q2M243 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC27Q2M243 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC27Q2M243 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CCDC27Q2M243 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CCDC27Q2M243 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC27Q2M243 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC7.19□□□□□ -1.26
CCDC27Q2M243 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC27Q2M243 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 Y_RNA.25-201ENST00000362528 102 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 DBIP1-201ENST00000401435 260 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 NUDT19P3-201ENST00000404698 555 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC068533.2-201ENST00000411872 306 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 FCF1P2-201ENST00000415284 583 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC233981.1-201ENST00000423224 461 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 CHEK2P5-201ENST00000423877 246 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC012519.1-201ENST00000424588 610 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 NPM1P24-201ENST00000428039 894 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 RPL12P17-201ENST00000432393 498 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 YWHAEP1-201ENST00000453697 763 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 MTCO2P18-201ENST00000457151 658 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC072039.1-201ENST00000477611 581 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC112198.1-201ENST00000505369 1220 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 MTATP6P22-201ENST00000507369 598 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 MTCO3P7-201ENST00000510008 774 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 RNU6-488P-201ENST00000515918 99 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC027309.2-201ENST00000520566 192 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 TRAV15-201ENST00000556680 249 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC103987.3-201ENST00000582071 292 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 AP001981.2-201ENST00000603241 418 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 AL158063.1-201ENST00000615349 536 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC073869.8-201ENST00000641806 335 ntBASIC7.18□□□□□ -1.26
CCDC27Q2M243 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC27Q2M243 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
CCDC27Q2M243 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC27Q2M243 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC27Q2M243 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CCDC27Q2M243 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC7.17□□□□□ -1.26
CCDC27Q2M243 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC27Q2M243 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC27Q2M243 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC27Q2M243 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC27Q2M243 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC27Q2M243 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC27Q2M243 RNA5SP132-201ENST00000364725 118 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 RN7SKP69-201ENST00000365390 305 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 RN7SKP81-201ENST00000365603 331 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC27Q2M243 MIR143-201ENST00000385300 106 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 U3.28-201ENST00000391249 210 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.17□□□□□ -1.26
CCDC27Q2M243 AL138880.1-201ENST00000405824 642 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 AL512422.1-201ENST00000407033 553 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 MIR1284-201ENST00000408337 120 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.17□□□□□ -1.26
CCDC27Q2M243 AP000534.2-201ENST00000412729 568 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC27Q2M243 AC092634.6-201ENST00000418558 192 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCDC27Q2M243 AC009965.2-201ENST00000425328 970 ntBASIC7.17□□□□□ -1.26
CCDC27Q2M243 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.17□□□□□ -1.26
CCDC27Q2M243 NPM1P18-201ENST00000434232 732 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms