Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGN3Q15651 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HMGN3Q15651 RPL23AP59-201ENST00000399415 461 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 AL583835.1-201ENST00000399570 407 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 AL133270.1-201ENST00000402635 279 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGN3Q15651 AL590609.2-201ENST00000421430 368 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 AL157831.1-201ENST00000426134 473 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 RPL23AP1-201ENST00000428990 471 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGN3Q15651 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGN3Q15651 AC006466.1-201ENST00000438721 289 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGN3Q15651 PHBP16-201ENST00000446318 950 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 RPL35AP28-201ENST00000459730 331 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 AC092045.1-201ENST00000495716 1231 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGN3Q15651 RNA5SP73-201ENST00000516744 108 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 AC063950.1-201ENST00000552036 308 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGN3Q15651 AC069366.1-201ENST00000583159 838 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 RPL12P25-202ENST00000598100 674 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.52□□□□□ -1.85
HMGN3Q15651 Z82195.1-201ENST00000604558 398 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGN3Q15651 AC002044.3-201ENST00000623314 541 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGN3Q15651 MIR6715B-201ENST00000637172 77 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGN3Q15651 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HMGN3Q15651 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGN3Q15651 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGN3Q15651 AC092162.3-201ENST00000624511 1624 ntBASIC3.52□□□□□ -1.85
HMGN3Q15651 PNPT1P2-201ENST00000456768 2050 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 AL606537.1-201ENST00000607258 2011 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGN3Q15651 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGN3Q15651 EIF2AP4-201ENST00000424793 1781 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 AC090017.1-201ENST00000548612 1779 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGN3Q15651 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGN3Q15651 RNA5SP332-201ENST00000391063 115 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGN3Q15651 AP000357.1-201ENST00000409926 1165 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGN3Q15651 AL590139.1-201ENST00000416267 400 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGN3Q15651 AC234781.4-201ENST00000419384 244 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 RPS26P40-201ENST00000435209 294 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 ARAFP2-201ENST00000440565 559 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGN3Q15651 MTCO3P20-201ENST00000454926 688 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 RN7SL98P-201ENST00000462271 300 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 AC010307.1-201ENST00000467206 836 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 RPL23AP72-201ENST00000492447 435 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGN3Q15651 KCTD9P2-201ENST00000512203 1013 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 IGLVIV-65-201ENST00000517313 360 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGN3Q15651 OR8G5-201ENST00000524943 1041 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGN3Q15651 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGN3Q15651 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGN3Q15651 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGN3Q15651 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGN3Q15651 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HMGN3Q15651 AC090948.1-201ENST00000607464 549 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGN3Q15651 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGN3Q15651 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGN3Q15651 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGN3Q15651 AL445363.3-201ENST00000623080 671 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGN3Q15651 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGN3Q15651 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
HMGN3Q15651 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGN3Q15651 AL132640.2-201ENST00000559968 1698 ntBASIC3.51□□□□□ -1.85
HMGN3Q15651 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGN3Q15651 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGN3Q15651 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HMGN3Q15651 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGN3Q15651 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.5□□□□□ -1.85
HMGN3Q15651 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HMGN3Q15651 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGN3Q15651 RN7SKP103-201ENST00000363848 320 ntBASIC3.5□□□□□ -1.85
HMGN3Q15651 SNORA58B-201ENST00000364259 136 ntBASIC3.5□□□□□ -1.85
HMGN3Q15651 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGN3Q15651 RPS16P5-201ENST00000406501 404 ntBASIC3.5□□□□□ -1.85
HMGN3Q15651 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGN3Q15651 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGN3Q15651 AC069213.2-201ENST00000420238 366 ntBASIC3.5□□□□□ -1.85
HMGN3Q15651 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGN3Q15651 AC087650.1-201ENST00000431445 468 ntBASIC3.5□□□□□ -1.85
HMGN3Q15651 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGN3Q15651 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGN3Q15651 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGN3Q15651 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.5□□□□□ -1.85
HMGN3Q15651 RPL7P32-201ENST00000457119 744 ntBASIC3.5□□□□□ -1.85
HMGN3Q15651 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HMGN3Q15651 APOOP2-201ENST00000461561 539 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms