Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 ZNF962P-201ENST00000443465 3140 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SIX1Q15475 OR5P1P-201ENST00000299512 925 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 RNU6-1251P-201ENST00000364502 107 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 SNORD51.1-201ENST00000365405 77 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SIX1Q15475 MIR192-201ENST00000384915 110 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SIX1Q15475 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SIX1Q15475 RPL26P29-201ENST00000415623 438 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX1Q15475 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.42□□□□□ -1.7
SIX1Q15475 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX1Q15475 AL606490.7-201ENST00000433136 191 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.42□□□□□ -1.7
SIX1Q15475 AL138787.1-202ENST00000437804 898 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 RPL23AP52-201ENST00000439311 478 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 TPT1P13-201ENST00000449760 499 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 MTND2P30-201ENST00000456663 382 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 AC104629.2-201ENST00000468627 598 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 RN7SL738P-201ENST00000470264 297 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 OR52A4P-201ENST00000472867 958 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX1Q15475 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX1Q15475 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX1Q15475 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX1Q15475 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.42□□□□□ -1.7
SIX1Q15475 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX1Q15475 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX1Q15475 AP003049.1-201ENST00000529418 457 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 OR4R2P-201ENST00000530815 597 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX1Q15475 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX1Q15475 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.42□□□□□ -1.7
SIX1Q15475 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SIX1Q15475 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SIX1Q15475 RMST_5.1-201ENST00000618704 126 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 MIR7703-201ENST00000620784 77 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 AL445363.3-201ENST00000623080 671 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 AC097372.4-201ENST00000625025 466 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 AL138960.2-201ENST00000625145 535 ntBASIC4.42□□□□□ -1.7
SIX1Q15475 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SIX1Q15475 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.42□□□□□ -1.7
SIX1Q15475 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SIX1Q15475 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SIX1Q15475 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.41□□□□□ -1.7
SIX1Q15475 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SIX1Q15475 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SIX1Q15475 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.41□□□□□ -1.7
SIX1Q15475 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 RNA5SP175-201ENST00000364275 119 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 OR13C3-201ENST00000374781 1108 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 SNORA11F-201ENST00000408237 128 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AP000357.1-201ENST00000409926 1165 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.41□□□□□ -1.7
SIX1Q15475 AL590139.1-201ENST00000416267 400 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.41□□□□□ -1.7
SIX1Q15475 AC073508.1-201ENST00000428866 656 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX1Q15475 AL138878.2-201ENST00000440581 1241 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX1Q15475 AL157884.3-201ENST00000448273 1184 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AL162591.2-201ENST00000449634 317 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AL513533.1-201ENST00000453728 415 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 RN7SL354P-201ENST00000469282 294 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 RPS26P15-201ENST00000488067 348 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 RPS27AP16-201ENST00000492222 470 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX1Q15475 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.41□□□□□ -1.7
SIX1Q15475 HNRNPKP5-201ENST00000515300 253 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 RNA5SP360-201ENST00000516555 118 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 IGHV3-63-201ENST00000518422 341 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AC022882.1-201ENST00000532142 501 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.41□□□□□ -1.7
SIX1Q15475 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.41□□□□□ -1.7
SIX1Q15475 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.41□□□□□ -1.7
SIX1Q15475 CKS1BP1-201ENST00000555221 240 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.41□□□□□ -1.7
SIX1Q15475 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.41□□□□□ -1.7
SIX1Q15475 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.41□□□□□ -1.7
SIX1Q15475 AL158211.2-201ENST00000607282 395 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AC092953.2-201ENST00000608000 699 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 MIR6780A-201ENST00000615089 68 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.41□□□□□ -1.7
SIX1Q15475 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 AC015722.2-201ENST00000622210 551 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 AC021106.3-201ENST00000623925 531 ntBASIC4.41□□□□□ -1.7
SIX1Q15475 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SIX1Q15475 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIX1Q15475 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms