Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 Y_RNA.704-201ENST00000516851 102 ntBASIC6.38□□□□□ -1.39
SOX4Q06945 GTF2IP11-201ENST00000526931 420 ntBASIC6.38□□□□□ -1.39
SOX4Q06945 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.38□□□□□ -1.39
SOX4Q06945 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.38□□□□□ -1.39
SOX4Q06945 MIR4795-201ENST00000584182 89 ntBASIC6.38□□□□□ -1.39
SOX4Q06945 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.38□□□□□ -1.39
SOX4Q06945 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.38□□□□□ -1.39
SOX4Q06945 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SOX4Q06945 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.38□□□□□ -1.39
SOX4Q06945 AC092650.2-201ENST00000619984 902 ntBASIC6.38□□□□□ -1.39
SOX4Q06945 SNORA17.5-201ENST00000630429 132 ntBASIC6.38□□□□□ -1.39
SOX4Q06945 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
SOX4Q06945 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.38□□□□□ -1.39
SOX4Q06945 WDR95P-201ENST00000425638 1542 ntBASIC6.38□□□□□ -1.39
SOX4Q06945 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.38□□□□□ -1.39
SOX4Q06945 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.38□□□□□ -1.39
SOX4Q06945 AL031985.3-201ENST00000565390 2449 ntBASIC6.38□□□□□ -1.39
SOX4Q06945 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX4Q06945 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX4Q06945 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.38□□□□□ -1.39
SOX4Q06945 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SOX4Q06945 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
SOX4Q06945 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SOX4Q06945 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SOX4Q06945 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SOX4Q06945 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
SOX4Q06945 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX4Q06945 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
SOX4Q06945 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.37□□□□□ -1.39
SOX4Q06945 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SOX4Q06945 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SOX4Q06945 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SOX4Q06945 CYP1D1P-201ENST00000416662 1433 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SOX4Q06945 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX4Q06945 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX4Q06945 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX4Q06945 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX4Q06945 Y_RNA.279-201ENST00000364763 95 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 RN7SKP81-201ENST00000365603 331 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SOX4Q06945 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.37□□□□□ -1.39
SOX4Q06945 RPL23AP47-201ENST00000408017 460 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 RN7SKP29-201ENST00000410957 272 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 MRPL53P1-201ENST00000414323 319 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 FCF1P2-201ENST00000415284 583 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AC007390.1-201ENST00000415722 356 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.37□□□□□ -1.39
SOX4Q06945 RPS27AP14-201ENST00000422868 454 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 CHEK2P5-201ENST00000423877 246 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AL513185.2-201ENST00000425543 193 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.37□□□□□ -1.39
SOX4Q06945 AC099677.3-201ENST00000427081 395 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 SKP1P3-201ENST00000429280 487 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AC005534.2-201ENST00000431047 433 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.37□□□□□ -1.39
SOX4Q06945 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.37□□□□□ -1.39
SOX4Q06945 PPIAP17-201ENST00000438507 471 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.37□□□□□ -1.39
SOX4Q06945 RPL36AP39-201ENST00000445859 318 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 HMGN1P36-201ENST00000446623 298 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 USP9YP12-201ENST00000450481 570 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 ACA64.4-201ENST00000459070 127 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.37□□□□□ -1.39
SOX4Q06945 RPL5P12-201ENST00000477071 851 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AC124945.1-201ENST00000485133 188 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.37□□□□□ -1.39
SOX4Q06945 AC022447.3-201ENST00000506865 495 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 RNU6-1004P-201ENST00000516584 111 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 FAM92A1P1-201ENST00000528023 890 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SOX4Q06945 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.37□□□□□ -1.39
SOX4Q06945 AC091078.2-201ENST00000557145 559 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.37□□□□□ -1.39
SOX4Q06945 AC090651.1-201ENST00000567865 634 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 TXNP4-201ENST00000575018 310 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AC136618.2-201ENST00000575091 400 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 RN7SL753P-201ENST00000581238 290 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 MIR132-201ENST00000591554 101 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AC073091.2-201ENST00000603205 907 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AL596327.1-201ENST00000603629 213 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.37□□□□□ -1.39
SOX4Q06945 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.37□□□□□ -1.39
SOX4Q06945 AC005332.6-201ENST00000613178 446 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 MLECP1-201ENST00000615893 709 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 AC068880.5-201ENST00000624331 290 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.37□□□□□ -1.39
SOX4Q06945 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.37□□□□□ -1.39
SOX4Q06945 MIR1321-201ENST00000637766 79 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SOX4Q06945 AC093297.3-201ENST00000607056 2517 ntBASIC6.37□□□□□ -1.39
SOX4Q06945 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SOX4Q06945 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX4Q06945 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SOX4Q06945 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SOX4Q06945 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 AL161901.1-201ENST00000624954 3425 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms