Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.01□□□□□ -1.61
GABPAQ06546 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.01□□□□□ -1.61
GABPAQ06546 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.01□□□□□ -1.61
GABPAQ06546 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.01□□□□□ -1.61
GABPAQ06546 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.01□□□□□ -1.61
GABPAQ06546 RN7SKP46-201ENST00000515942 234 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 OR7E10P-201ENST00000526420 991 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.01□□□□□ -1.61
GABPAQ06546 AC068993.1-201ENST00000546724 589 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.01□□□□□ -1.61
GABPAQ06546 AC093591.2-201ENST00000565254 3843 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.01□□□□□ -1.61
GABPAQ06546 AL592494.3-201ENST00000609485 464 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 MIR7151-201ENST00000617477 60 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
GABPAQ06546 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
GABPAQ06546 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5□□□□□ -1.61
GABPAQ06546 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
GABPAQ06546 SPRR2C-201ENST00000290702 219 ntBASIC5□□□□□ -1.61
GABPAQ06546 RNA5SP130-201ENST00000364431 114 ntBASIC5□□□□□ -1.61
GABPAQ06546 AL359643.1-201ENST00000404109 423 ntBASIC5□□□□□ -1.61
GABPAQ06546 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5□□□□□ -1.61
GABPAQ06546 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5□□□□□ -1.61
GABPAQ06546 MTCO1P57-201ENST00000432182 261 ntBASIC5□□□□□ -1.61
GABPAQ06546 CEACAMP1-201ENST00000434624 1035 ntBASIC5□□□□□ -1.61
GABPAQ06546 ARAFP2-201ENST00000440565 559 ntBASIC5□□□□□ -1.61
GABPAQ06546 RPS27AP15-201ENST00000447672 466 ntBASIC5□□□□□ -1.61
GABPAQ06546 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5□□□□□ -1.61
GABPAQ06546 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5□□□□□ -1.61
GABPAQ06546 AC093824.1-201ENST00000508796 343 ntBASIC5□□□□□ -1.61
GABPAQ06546 AC026402.1-201ENST00000513642 170 ntBASIC5□□□□□ -1.61
GABPAQ06546 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5□□□□□ -1.61
GABPAQ06546 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5□□□□□ -1.61
GABPAQ06546 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5□□□□□ -1.61
GABPAQ06546 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5□□□□□ -1.61
GABPAQ06546 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5□□□□□ -1.61
GABPAQ06546 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
GABPAQ06546 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5□□□□□ -1.61
GABPAQ06546 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5□□□□□ -1.61
GABPAQ06546 DUX4L52-201ENST00000549363 777 ntBASIC5□□□□□ -1.61
GABPAQ06546 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5□□□□□ -1.61
GABPAQ06546 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5□□□□□ -1.61
GABPAQ06546 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5□□□□□ -1.61
GABPAQ06546 AL158062.1-201ENST00000619632 745 ntBASIC5□□□□□ -1.61
GABPAQ06546 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5□□□□□ -1.61
GABPAQ06546 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5□□□□□ -1.61
GABPAQ06546 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
GABPAQ06546 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5□□□□□ -1.61
GABPAQ06546 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
GABPAQ06546 TCP1P3-201ENST00000414406 1498 ntBASIC5□□□□□ -1.61
GABPAQ06546 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.99□□□□□ -1.61
GABPAQ06546 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.99□□□□□ -1.61
GABPAQ06546 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
GABPAQ06546 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.99□□□□□ -1.61
GABPAQ06546 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.99□□□□□ -1.61
GABPAQ06546 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.99□□□□□ -1.61
GABPAQ06546 MTCO1P45-201ENST00000431457 267 ntBASIC4.99□□□□□ -1.61
GABPAQ06546 MTCYBP21-201ENST00000443300 1113 ntBASIC4.99□□□□□ -1.61
GABPAQ06546 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.99□□□□□ -1.61
GABPAQ06546 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 TPT1P1-201ENST00000458495 518 ntBASIC4.99□□□□□ -1.61
GABPAQ06546 RNA5SP103-201ENST00000459503 118 ntBASIC4.99□□□□□ -1.61
GABPAQ06546 AC105233.3-201ENST00000531125 744 ntBASIC4.99□□□□□ -1.61
GABPAQ06546 OR8R1P-201ENST00000543943 764 ntBASIC4.99□□□□□ -1.61
GABPAQ06546 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.99□□□□□ -1.61
GABPAQ06546 AC073111.2-201ENST00000605657 1075 ntBASIC4.99□□□□□ -1.61
GABPAQ06546 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.99□□□□□ -1.61
GABPAQ06546 AC010608.2-201ENST00000624830 470 ntBASIC4.99□□□□□ -1.61
GABPAQ06546 AC006971.1-201ENST00000407916 4486 ntBASIC4.99□□□□□ -1.61
GABPAQ06546 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.99□□□□□ -1.61
GABPAQ06546 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
GABPAQ06546 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GABPAQ06546 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GABPAQ06546 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
GABPAQ06546 OR51C1P-202ENST00000641159 1444 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
GABPAQ06546 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GABPAQ06546 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
GABPAQ06546 RNA5SP22-201ENST00000365393 109 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
GABPAQ06546 RNU6-152P-201ENST00000384037 107 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.98□□□□□ -1.61
GABPAQ06546 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.98□□□□□ -1.61
GABPAQ06546 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.98□□□□□ -1.61
GABPAQ06546 UBTFL3-201ENST00000418934 1024 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.98□□□□□ -1.61
GABPAQ06546 AC013470.3-201ENST00000420252 1194 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 AC012519.1-201ENST00000424588 610 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 AL606490.8-201ENST00000441624 319 ntBASIC4.98□□□□□ -1.61
GABPAQ06546 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms