Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RPL26P30-202ENST00000602923 645 ntBASIC4.1□□□□□ -1.75
HMGCS1Q01581 AC113403.1-201ENST00000604910 193 ntBASIC4.1□□□□□ -1.75
HMGCS1Q01581 AC025175.1-201ENST00000606482 759 ntBASIC4.1□□□□□ -1.75
HMGCS1Q01581 AC117490.2-201ENST00000610042 594 ntBASIC4.1□□□□□ -1.75
HMGCS1Q01581 uc_338.13-201ENST00000618243 179 ntBASIC4.1□□□□□ -1.75
HMGCS1Q01581 AL445363.3-201ENST00000623080 671 ntBASIC4.1□□□□□ -1.75
HMGCS1Q01581 AC010435.1-201ENST00000623353 1177 ntBASIC4.1□□□□□ -1.75
HMGCS1Q01581 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS1Q01581 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HMGCS1Q01581 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGCS1Q01581 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HMGCS1Q01581 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HMGCS1Q01581 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HMGCS1Q01581 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS1Q01581 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS1Q01581 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.1□□□□□ -1.75
HMGCS1Q01581 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HMGCS1Q01581 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGCS1Q01581 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 ZNF962P-201ENST00000443465 3140 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGCS1Q01581 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGCS1Q01581 RNU1-32P-201ENST00000363937 159 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 SNORA11F-201ENST00000408237 128 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 AC009480.2-201ENST00000422916 432 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 MTND4LP13-201ENST00000425022 298 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 UBE2V2P3-201ENST00000433562 437 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 AL132765.1-201ENST00000434165 553 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 FHP1-201ENST00000442741 703 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 PHBP16-201ENST00000446318 950 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 CYCSP42-201ENST00000450823 238 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 AC090312.1-201ENST00000580637 348 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 AC005191.1-201ENST00000603950 358 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 AC064801.1-201ENST00000612025 407 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 MIR7641-1-201ENST00000627518 61 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 BMS1P21-201ENST00000634565 365 ntBASIC4.09□□□□□ -1.75
HMGCS1Q01581 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGCS1Q01581 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.09□□□□□ -1.76
HMGCS1Q01581 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HMGCS1Q01581 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
HMGCS1Q01581 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
HMGCS1Q01581 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 AL133243.3-201ENST00000617415 3004 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 OR10J6P-201ENST00000289731 930 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 RNA5SP388-201ENST00000362584 119 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 RNA5SP447-201ENST00000363749 119 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC240504.1-201ENST00000395709 845 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 AL035696.2-201ENST00000407941 709 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 ELOCP19-201ENST00000411919 318 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 NRBF2P2-201ENST00000413087 861 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 AL807761.1-201ENST00000417622 171 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 MFSD13B-201ENST00000420133 1290 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 GAPDHP49-201ENST00000421421 961 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 RPS26P47-201ENST00000427219 348 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC011998.1-201ENST00000433403 117 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGCS1Q01581 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 RPL5P30-201ENST00000465511 891 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC010374.1-201ENST00000503762 1237 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 PARP4P3-201ENST00000510265 317 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 NDUFB4P12-201ENST00000513465 390 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 RNA5SP154-201ENST00000516193 111 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC069240.1-201ENST00000548774 375 ntBASIC4.08□□□□□ -1.76
HMGCS1Q01581 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms