Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX6-1P78426 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 RN7SL57P-201ENST00000493687 290 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 RPS6P4-201ENST00000494693 758 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX6-1P78426 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX6-1P78426 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX6-1P78426 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX6-1P78426 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC074051.3-201ENST00000570238 358 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX6-1P78426 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 NF1P5-201ENST00000588287 448 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 MIR132-201ENST00000591554 101 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC116651.1-201ENST00000609724 556 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC073114.1-201ENST00000612027 490 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 uc_338.26-201ENST00000612659 160 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 HULC.1-201ENST00000612720 240 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC016769.4-201ENST00000616893 535 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC091965.5-201ENST00000624785 342 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AC120349.2-201ENST00000625002 298 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NKX6-1P78426 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NKX6-1P78426 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 ZNF37BP-203ENST00000452306 1352 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC097063.1-201ENST00000426714 1797 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX6-1P78426 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 RNA5SP453-201ENST00000362503 119 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 RNU6-216P-201ENST00000363282 104 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 RNA5SP500-201ENST00000364486 119 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AL034370.1-201ENST00000397254 1590 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 ATP5F1P4-201ENST00000397288 746 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 FABP12P1-201ENST00000401911 322 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AL121835.1-201ENST00000404250 354 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX6-1P78426 RBMY2KP-201ENST00000418221 992 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 RPS4XP5-201ENST00000419038 768 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 PDZK1P1-202ENST00000425209 1350 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX6-1P78426 B3GNT2P1-201ENST00000434960 952 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 SPRYD7P1-201ENST00000443861 570 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX6-1P78426 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 ACA64.4-201ENST00000459070 127 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX6-1P78426 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX6-1P78426 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX6-1P78426 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX6-1P78426 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 Y_RNA.655-201ENST00000515919 96 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX6-1P78426 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX6-1P78426 OR5BR1P-201ENST00000524992 1330 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX6-1P78426 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX6-1P78426 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NKX6-1P78426 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NKX6-1P78426 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX6-1P78426 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
NKX6-1P78426 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX6-1P78426 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.1□□□□□ -1.59
NKX6-1P78426 AC024909.2-201ENST00000553035 286 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.1□□□□□ -1.59
NKX6-1P78426 AC090515.3-201ENST00000560431 315 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms