Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
AP3S2P59780 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
AP3S2P59780 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S2P59780 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.68□□□□□ -1.82
AP3S2P59780 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S2P59780 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S2P59780 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
AP3S2P59780 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S2P59780 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S2P59780 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S2P59780 MIR1179-201ENST00000408703 91 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 RNA5SP178-201ENST00000410380 128 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 RPL35AP24-201ENST00000413846 330 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 PTP4A1P5-201ENST00000420305 455 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 IPPKP1-201ENST00000422501 768 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.68□□□□□ -1.82
AP3S2P59780 AC096638.2-201ENST00000434965 711 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S2P59780 PTMAP6-201ENST00000439110 327 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AC114495.1-201ENST00000441274 436 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AC112498.1-201ENST00000444401 332 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.68□□□□□ -1.82
AP3S2P59780 OR1H1P-201ENST00000448731 937 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 HMGN2P7-201ENST00000456186 273 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 RPL9P32-201ENST00000464118 620 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 RPL23AP72-201ENST00000492447 435 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AP001086.1-201ENST00000494882 321 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AC023050.1-201ENST00000498198 304 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.68□□□□□ -1.82
AP3S2P59780 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
AP3S2P59780 AC010342.1-201ENST00000514047 877 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.68□□□□□ -1.82
AP3S2P59780 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
AP3S2P59780 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.68□□□□□ -1.82
AP3S2P59780 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S2P59780 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.68□□□□□ -1.82
AP3S2P59780 AL110118.1-201ENST00000553543 400 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AC067852.4-201ENST00000590314 478 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AC068020.1-201ENST00000594215 661 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AC244505.7-201ENST00000599675 272 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AC012531.5-201ENST00000611375 151 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AC022960.2-201ENST00000616300 666 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 AL049536.1-201ENST00000625043 744 ntBASIC3.68□□□□□ -1.82
AP3S2P59780 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.68□□□□□ -1.82
AP3S2P59780 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.68□□□□□ -1.82
AP3S2P59780 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S2P59780 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP3S2P59780 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S2P59780 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S2P59780 SAGE2P-201ENST00000420011 2126 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S2P59780 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.67□□□□□ -1.82
AP3S2P59780 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S2P59780 NPM1P26-201ENST00000426339 738 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 OR2B7P-201ENST00000429302 934 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S2P59780 NRBF2P3-201ENST00000432731 865 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S2P59780 PPIAP17-201ENST00000438507 471 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S2P59780 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.67□□□□□ -1.82
AP3S2P59780 CEACAMP4-201ENST00000457676 421 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 AC090114.3-201ENST00000479267 829 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
AP3S2P59780 NIPA2P2-201ENST00000496376 1083 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC3.67□□□□□ -1.82
AP3S2P59780 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.67□□□□□ -1.82
AP3S2P59780 RNA5SP143-201ENST00000516936 115 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 IGKV2-38-201ENST00000517443 247 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 AC022832.1-201ENST00000530718 645 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.67□□□□□ -1.82
AP3S2P59780 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S2P59780 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.67□□□□□ -1.82
AP3S2P59780 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S2P59780 AP000864.1-201ENST00000609424 650 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 AC126175.1-201ENST00000617041 758 ntBASIC3.67□□□□□ -1.82
AP3S2P59780 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S2P59780 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S2P59780 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S2P59780 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
AP3S2P59780 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
AP3S2P59780 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S2P59780 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
AP3S2P59780 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.67□□□□□ -1.82
AP3S2P59780 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.66□□□□□ -1.82
AP3S2P59780 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.66□□□□□ -1.82
AP3S2P59780 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP3S2P59780 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
AP3S2P59780 SNORD6-201ENST00000365444 73 ntBASIC3.66□□□□□ -1.82
AP3S2P59780 RN7SKP187-201ENST00000365536 330 ntBASIC3.66□□□□□ -1.82
AP3S2P59780 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.66□□□□□ -1.82
AP3S2P59780 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP3S2P59780 CHEK2P3-201ENST00000416118 248 ntBASIC3.66□□□□□ -1.82
AP3S2P59780 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.66□□□□□ -1.82
AP3S2P59780 VN1R3-201ENST00000418822 919 ntBASIC3.66□□□□□ -1.82
AP3S2P59780 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP3S2P59780 AC017083.1-201ENST00000428093 483 ntBASIC3.66□□□□□ -1.82
AP3S2P59780 AL365396.1-201ENST00000430854 671 ntBASIC3.66□□□□□ -1.82
AP3S2P59780 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms