Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RPL32P33-201ENST00000487023 394 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 AC096751.1-202ENST00000502691 1067 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 HMGB1P28-201ENST00000507778 552 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.09□□□□□ -1.59
CLRN1P58418 AC110775.1-201ENST00000513721 462 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.09□□□□□ -1.59
CLRN1P58418 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.09□□□□□ -1.59
CLRN1P58418 AC139365.2-201ENST00000517972 253 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 IGLVIV-64-201ENST00000518581 301 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.09□□□□□ -1.59
CLRN1P58418 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.09□□□□□ -1.59
CLRN1P58418 HIGD1AP6-201ENST00000521833 279 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 IGLV3-30-201ENST00000524362 298 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.09□□□□□ -1.59
CLRN1P58418 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLRN1P58418 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.09□□□□□ -1.59
CLRN1P58418 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.09□□□□□ -1.59
CLRN1P58418 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.09□□□□□ -1.59
CLRN1P58418 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.09□□□□□ -1.59
CLRN1P58418 AL138895.2-201ENST00000603019 178 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 NDUFA8P1-201ENST00000605525 367 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.09□□□□□ -1.59
CLRN1P58418 AC025588.4-201ENST00000615802 908 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 AC234782.5-201ENST00000617723 324 ntBASIC5.09□□□□□ -1.59
CLRN1P58418 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLRN1P58418 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLRN1P58418 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLRN1P58418 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLRN1P58418 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.09□□□□□ -1.59
CLRN1P58418 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.09□□□□□ -1.59
CLRN1P58418 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
CLRN1P58418 AL079343.1-201ENST00000572358 1771 ntBASIC5.09□□□□□ -1.6
CLRN1P58418 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
CLRN1P58418 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CLRN1P58418 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.08□□□□□ -1.6
CLRN1P58418 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CLRN1P58418 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLRN1P58418 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.08□□□□□ -1.6
CLRN1P58418 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.08□□□□□ -1.6
CLRN1P58418 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLRN1P58418 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLRN1P58418 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLRN1P58418 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.08□□□□□ -1.6
CLRN1P58418 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.08□□□□□ -1.6
CLRN1P58418 OR10J6P-201ENST00000289731 930 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.08□□□□□ -1.6
CLRN1P58418 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLRN1P58418 RNU1-136P-201ENST00000384181 164 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 EI24P3-201ENST00000399046 1062 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 RNU2-66P-201ENST00000410650 161 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 RPS7P13-201ENST00000413955 498 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.08□□□□□ -1.6
CLRN1P58418 AC104651.1-201ENST00000427559 735 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 BX323845.3-201ENST00000428215 527 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 DYNLL1P7-201ENST00000429273 258 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.08□□□□□ -1.6
CLRN1P58418 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.08□□□□□ -1.6
CLRN1P58418 AL592447.1-201ENST00000447592 540 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 SSXP1-201ENST00000453640 473 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 DNAJC19P1-201ENST00000455312 319 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 AL133244.1-201ENST00000456007 258 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 GYG1P1-201ENST00000460864 698 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 RN7SL570P-201ENST00000484405 292 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 AC090013.1-201ENST00000485147 480 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.08□□□□□ -1.6
CLRN1P58418 BNIP3P41-201ENST00000503774 571 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 SNX5P1-201ENST00000505757 1041 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 MTND2P33-201ENST00000506452 1031 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.08□□□□□ -1.6
CLRN1P58418 GLUD1P3-202ENST00000508551 200 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.08□□□□□ -1.6
CLRN1P58418 MTCYBP43-201ENST00000513621 740 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 AC021678.3-201ENST00000517893 476 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 AC060775.1-201ENST00000518241 520 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 AC008562.1-201ENST00000521763 330 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.08□□□□□ -1.6
CLRN1P58418 OR8Q1P-201ENST00000526467 655 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.08□□□□□ -1.6
CLRN1P58418 MTCYBP41-201ENST00000528913 1123 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.08□□□□□ -1.6
CLRN1P58418 AC016957.1-201ENST00000534895 309 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.08□□□□□ -1.6
CLRN1P58418 AC137768.1-201ENST00000549998 553 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 AC096996.1-201ENST00000563813 325 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.08□□□□□ -1.6
CLRN1P58418 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.08□□□□□ -1.6
CLRN1P58418 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.08□□□□□ -1.6
CLRN1P58418 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.08□□□□□ -1.6
CLRN1P58418 AC079315.1-201ENST00000602952 623 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLRN1P58418 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.08□□□□□ -1.6
CLRN1P58418 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CLRN1P58418 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLRN1P58418 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLRN1P58418 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.08□□□□□ -1.6
CLRN1P58418 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLRN1P58418 AC012020.1-201ENST00000624541 1728 ntBASIC5.08□□□□□ -1.6
CLRN1P58418 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLRN1P58418 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLRN1P58418 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms