Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL158196.1-201ENST00000616786 434 ntBASIC4.16□□□□□ -1.74
VSX2P58304 AL669942.2-201ENST00000620352 697 ntBASIC4.16□□□□□ -1.74
VSX2P58304 BMS1P21-201ENST00000634565 365 ntBASIC4.16□□□□□ -1.74
VSX2P58304 MIR6830-201ENST00000636015 70 ntBASIC4.16□□□□□ -1.74
VSX2P58304 FP325313.1-201ENST00000638228 703 ntBASIC4.16□□□□□ -1.74
VSX2P58304 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VSX2P58304 AL139254.3-201ENST00000641097 674 ntBASIC4.16□□□□□ -1.74
VSX2P58304 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
VSX2P58304 EOGT-210ENST00000615922 1931 ntBASIC4.16□□□□□ -1.74
VSX2P58304 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VSX2P58304 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VSX2P58304 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VSX2P58304 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VSX2P58304 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VSX2P58304 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VSX2P58304 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VSX2P58304 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
VSX2P58304 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
VSX2P58304 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.15□□□□□ -1.74
VSX2P58304 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VSX2P58304 AL158163.1-201ENST00000603915 1649 ntBASIC4.15□□□□□ -1.74
VSX2P58304 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
VSX2P58304 MIR708-201ENST00000390708 88 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AL583835.1-201ENST00000399570 407 ntBASIC4.15□□□□□ -1.75
VSX2P58304 NRBF2P2-201ENST00000413087 861 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VSX2P58304 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX2P58304 RPEP2-201ENST00000432149 701 ntBASIC4.15□□□□□ -1.75
VSX2P58304 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.15□□□□□ -1.75
VSX2P58304 ACTR3P2-201ENST00000439585 1257 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AC069285.2-201ENST00000440210 275 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AL357520.1-201ENST00000441557 453 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX2P58304 HSPE1P22-201ENST00000456856 327 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX2P58304 RPL23AP65-201ENST00000475608 468 ntBASIC4.15□□□□□ -1.75
VSX2P58304 RN7SL41P-201ENST00000476144 297 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AC090013.1-201ENST00000485147 480 ntBASIC4.15□□□□□ -1.75
VSX2P58304 PARP4P3-201ENST00000510265 317 ntBASIC4.15□□□□□ -1.75
VSX2P58304 NPM1P52-201ENST00000518264 846 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX2P58304 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX2P58304 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VSX2P58304 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX2P58304 AC090312.1-201ENST00000580637 348 ntBASIC4.15□□□□□ -1.75
VSX2P58304 MIR3939-201ENST00000582614 106 ntBASIC4.15□□□□□ -1.75
VSX2P58304 IPO5P1-202ENST00000600039 287 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AL354984.3-201ENST00000604803 325 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX2P58304 AC005962.2-201ENST00000611427 652 ntBASIC4.15□□□□□ -1.75
VSX2P58304 AL021997.2-201ENST00000615674 271 ntBASIC4.15□□□□□ -1.75
VSX2P58304 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.15□□□□□ -1.75
VSX2P58304 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.15□□□□□ -1.75
VSX2P58304 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VSX2P58304 ASNSP1-201ENST00000518311 1939 ntBASIC4.15□□□□□ -1.75
VSX2P58304 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.15□□□□□ -1.75
VSX2P58304 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
VSX2P58304 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
VSX2P58304 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VSX2P58304 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VSX2P58304 MIR448-201ENST00000362131 111 ntBASIC4.14□□□□□ -1.75
VSX2P58304 RNU1-108P-201ENST00000362556 161 ntBASIC4.14□□□□□ -1.75
VSX2P58304 RNU6-697P-201ENST00000363348 107 ntBASIC4.14□□□□□ -1.75
VSX2P58304 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.14□□□□□ -1.75
VSX2P58304 OR6C69P-201ENST00000394268 893 ntBASIC4.14□□□□□ -1.75
VSX2P58304 AL049693.1-201ENST00000402760 611 ntBASIC4.14□□□□□ -1.75
VSX2P58304 AL078604.1-201ENST00000404609 466 ntBASIC4.14□□□□□ -1.75
VSX2P58304 SNORA74C-2-201ENST00000411179 201 ntBASIC4.14□□□□□ -1.75
VSX2P58304 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.14□□□□□ -1.75
VSX2P58304 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.14□□□□□ -1.75
VSX2P58304 RPL23AP26-201ENST00000412728 464 ntBASIC4.14□□□□□ -1.75
VSX2P58304 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.14□□□□□ -1.75
VSX2P58304 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.14□□□□□ -1.75
VSX2P58304 AL132765.1-201ENST00000434165 553 ntBASIC4.14□□□□□ -1.75
VSX2P58304 UBE2V2P1-201ENST00000434717 398 ntBASIC4.14□□□□□ -1.75
VSX2P58304 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.14□□□□□ -1.75
VSX2P58304 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.14□□□□□ -1.75
VSX2P58304 RPS27AP15-201ENST00000447672 466 ntBASIC4.14□□□□□ -1.75
VSX2P58304 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VSX2P58304 RPL7P22-201ENST00000466005 733 ntBASIC4.14□□□□□ -1.75
VSX2P58304 AC068587.1-201ENST00000483613 781 ntBASIC4.14□□□□□ -1.75
VSX2P58304 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.14□□□□□ -1.75
VSX2P58304 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.14□□□□□ -1.75
VSX2P58304 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.14□□□□□ -1.75
VSX2P58304 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.14□□□□□ -1.75
VSX2P58304 AC138701.1-201ENST00000524329 714 ntBASIC4.14□□□□□ -1.75
VSX2P58304 TRAV8-5-201ENST00000537369 341 ntBASIC4.14□□□□□ -1.75
VSX2P58304 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VSX2P58304 AL352979.3-201ENST00000553515 247 ntBASIC4.14□□□□□ -1.75
VSX2P58304 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.14□□□□□ -1.75
VSX2P58304 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.14□□□□□ -1.75
VSX2P58304 MIR3138-201ENST00000585238 82 ntBASIC4.14□□□□□ -1.75
VSX2P58304 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VSX2P58304 SLC25A36P1-201ENST00000590111 465 ntBASIC4.14□□□□□ -1.75
VSX2P58304 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VSX2P58304 AC016717.3-201ENST00000624730 554 ntBASIC4.14□□□□□ -1.75
VSX2P58304 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VSX2P58304 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VSX2P58304 VPS35P1-201ENST00000563400 1518 ntBASIC4.14□□□□□ -1.75
VSX2P58304 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms