Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 uc_338.9-201ENST00000617424 182 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AC109809.1-201ENST00000619665 545 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AC091905.4-201ENST00000623432 202 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLDN20P56880 AC100871.1-201ENST00000507871 1456 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.53□□□□□ -1.68
CLDN20P56880 Z95327.2-201ENST00000414579 1873 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN20P56880 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN20P56880 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN20P56880 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN20P56880 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN20P56880 SNORA51.8-201ENST00000384234 132 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 RNU6-549P-201ENST00000384433 107 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 SNORA70.10-201ENST00000384515 134 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 MCTS2P-201ENST00000394552 546 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 U3.32-201ENST00000408116 212 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN20P56880 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 CYCSP10-201ENST00000417973 294 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AL449283.1-202ENST00000418249 604 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC013429.2-201ENST00000418798 781 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN20P56880 AC092634.2-201ENST00000428146 1010 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN20P56880 OR7E125P-201ENST00000443450 846 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AL137845.2-201ENST00000444292 988 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC004980.3-201ENST00000447046 365 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC022431.1-201ENST00000450941 438 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 AC002553.2-201ENST00000453217 340 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 AC244505.3-201ENST00000454598 187 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 HMGB1P4-201ENST00000455362 567 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN20P56880 CDC42P1-201ENST00000456658 548 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 SNORD11.1-201ENST00000459482 85 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 RPS3AP6-201ENST00000484430 795 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC079203.1-201ENST00000487972 404 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC020890.1-201ENST00000491837 504 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.52□□□□□ -1.69
CLDN20P56880 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN20P56880 NDUFB5P1-201ENST00000508134 564 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN20P56880 RNA5SP249-201ENST00000516127 99 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC012339.2-201ENST00000523996 453 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AP000676.2-201ENST00000529711 301 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN20P56880 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN20P56880 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN20P56880 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN20P56880 AC018552.1-201ENST00000562099 811 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN20P56880 AL450336.1-201ENST00000605180 586 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC024940.4-201ENST00000605507 246 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 AC055764.2-201ENST00000610089 670 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 BX323046.1-201ENST00000610145 535 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AL353662.3-201ENST00000625131 237 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.52□□□□□ -1.69
CLDN20P56880 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN20P56880 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN20P56880 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN20P56880 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN20P56880 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN20P56880 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN20P56880 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 INTS6P1-201ENST00000504674 2530 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN20P56880 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN20P56880 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 RN7SKP95-201ENST00000362860 303 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CLDN20P56880 SNORA11B-201ENST00000408175 129 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 OR51B3P-201ENST00000412287 913 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 AL592310.1-201ENST00000414330 671 ntBASIC4.51□□□□□ -1.69
CLDN20P56880 CHEK2P3-201ENST00000416118 248 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms