Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC006504.3-201ENST00000586818 523 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 SLC25A36P1-201ENST00000590111 465 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 TPMTP1-201ENST00000592307 737 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AC079315.1-201ENST00000602952 623 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AC010200.2-201ENST00000605098 235 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 AL136097.3-201ENST00000611097 505 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 RN7SL261P-201ENST00000613441 282 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AC025253.1-201ENST00000613623 543 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AL137067.2-201ENST00000621202 131 ntBASIC5.55□□□□□ -1.52
GFRA1P56159 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
GFRA1P56159 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
GFRA1P56159 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
GFRA1P56159 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA1P56159 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA1P56159 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 QRSL1P1-201ENST00000400977 1540 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA1P56159 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 AC007114.2-201ENST00000576014 4281 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 XPOTP1-201ENST00000443317 2398 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.54□□□□□ -1.52
GFRA1P56159 RNU6-289P-201ENST00000364093 107 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 Y_RNA.256-201ENST00000364594 104 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 FCF1P10-201ENST00000407590 479 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 CCDC58P2-201ENST00000417131 366 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 RPL35AP31-201ENST00000418340 337 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA1P56159 NANOGP6-201ENST00000429190 847 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 YWHAZP8-201ENST00000436935 731 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.54□□□□□ -1.52
GFRA1P56159 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 Z82190.1-201ENST00000454534 490 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 AC099563.1-201ENST00000456086 418 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 AL359385.1-201ENST00000456509 365 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 AC023194.2-201ENST00000465398 406 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 RN7SL221P-201ENST00000466190 281 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 RPL7AP10-201ENST00000481016 791 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.54□□□□□ -1.52
GFRA1P56159 AC108078.1-201ENST00000508073 725 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.54□□□□□ -1.52
GFRA1P56159 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA1P56159 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 MIR3682-201ENST00000581338 84 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 AC091135.1-201ENST00000585943 307 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA1P56159 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.54□□□□□ -1.52
GFRA1P56159 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA1P56159 AC011497.2-201ENST00000600255 639 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 MIR6778-201ENST00000617912 73 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA1P56159 AC005609.4-201ENST00000625071 447 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 AC073488.3-201ENST00000631611 778 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 AC099654.14-201ENST00000638599 341 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.54□□□□□ -1.52
GFRA1P56159 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 AP002907.1-201ENST00000606361 1430 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.54□□□□□ -1.52
GFRA1P56159 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 RBMY1HP-201ENST00000382759 1389 ntBASIC5.54□□□□□ -1.52
GFRA1P56159 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA1P56159 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA1P56159 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
GFRA1P56159 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
GFRA1P56159 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
GFRA1P56159 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA1P56159 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
GFRA1P56159 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA1P56159 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.53□□□□□ -1.52
GFRA1P56159 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA1P56159 FARSBP1-201ENST00000435808 1778 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA1P56159 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
GFRA1P56159 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms