Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDH6P55285 OR51C1P-202ENST00000641159 1444 ntBASIC4.46□□□□□ -1.69
CDH6P55285 HSPD1P11-201ENST00000508643 1702 ntBASIC4.46□□□□□ -1.69
CDH6P55285 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CDH6P55285 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.46□□□□□ -1.69
CDH6P55285 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH6P55285 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH6P55285 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH6P55285 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH6P55285 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH6P55285 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH6P55285 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
CDH6P55285 RNA5SP447-201ENST00000363749 119 ntBASIC4.46□□□□□ -1.7
CDH6P55285 GSTM3P2-201ENST00000412746 530 ntBASIC4.46□□□□□ -1.7
CDH6P55285 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH6P55285 DYNLL1P7-201ENST00000429273 258 ntBASIC4.46□□□□□ -1.7
CDH6P55285 AC068287.1-201ENST00000430283 295 ntBASIC4.46□□□□□ -1.7
CDH6P55285 HLA-N-201ENST00000437516 135 ntBASIC4.46□□□□□ -1.7
CDH6P55285 CEACAMP9-201ENST00000442990 513 ntBASIC4.46□□□□□ -1.7
CDH6P55285 EIF4A1P11-201ENST00000451239 222 ntBASIC4.46□□□□□ -1.7
CDH6P55285 CLIC4P1-201ENST00000453177 535 ntBASIC4.46□□□□□ -1.7
CDH6P55285 AL354710.1-201ENST00000453641 246 ntBASIC4.46□□□□□ -1.7
CDH6P55285 RN7SL98P-201ENST00000462271 300 ntBASIC4.46□□□□□ -1.7
CDH6P55285 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH6P55285 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH6P55285 AC010374.1-201ENST00000503762 1237 ntBASIC4.46□□□□□ -1.7
CDH6P55285 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH6P55285 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.46□□□□□ -1.7
CDH6P55285 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH6P55285 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH6P55285 SEC11B-201ENST00000518383 499 ntBASIC4.46□□□□□ -1.7
CDH6P55285 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH6P55285 AC090819.1-201ENST00000523800 1111 ntBASIC4.46□□□□□ -1.7
CDH6P55285 AC006064.5-201ENST00000541782 248 ntBASIC4.46□□□□□ -1.7
CDH6P55285 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH6P55285 RN7SL176P-201ENST00000580352 264 ntBASIC4.46□□□□□ -1.7
CDH6P55285 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH6P55285 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.46□□□□□ -1.7
CDH6P55285 AL158196.1-201ENST00000616786 434 ntBASIC4.46□□□□□ -1.7
CDH6P55285 AC092159.4-201ENST00000624944 550 ntBASIC4.46□□□□□ -1.7
CDH6P55285 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH6P55285 AC140479.6-201ENST00000633535 357 ntBASIC4.46□□□□□ -1.7
CDH6P55285 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH6P55285 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
CDH6P55285 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH6P55285 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH6P55285 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDH6P55285 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH6P55285 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH6P55285 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH6P55285 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH6P55285 AC087190.4-201ENST00000574616 8334 ntBASIC4.45□□□□□ -1.7
CDH6P55285 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH6P55285 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CDH6P55285 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CDH6P55285 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH6P55285 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH6P55285 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CDH6P55285 AL034374.1-201ENST00000406329 351 ntBASIC4.45□□□□□ -1.7
CDH6P55285 CASKP1-201ENST00000412870 582 ntBASIC4.45□□□□□ -1.7
CDH6P55285 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH6P55285 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH6P55285 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH6P55285 RPS26P47-201ENST00000427219 348 ntBASIC4.45□□□□□ -1.7
CDH6P55285 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH6P55285 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.45□□□□□ -1.7
CDH6P55285 CACYBPP1-201ENST00000438592 684 ntBASIC4.45□□□□□ -1.7
CDH6P55285 BUD31P2-201ENST00000449374 300 ntBASIC4.45□□□□□ -1.7
CDH6P55285 RPL7P32-201ENST00000457119 744 ntBASIC4.45□□□□□ -1.7
CDH6P55285 RPL23AP24-201ENST00000458203 385 ntBASIC4.45□□□□□ -1.7
CDH6P55285 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH6P55285 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH6P55285 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH6P55285 AC104164.2-201ENST00000496953 495 ntBASIC4.45□□□□□ -1.7
CDH6P55285 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH6P55285 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH6P55285 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.45□□□□□ -1.7
CDH6P55285 AC010476.1-201ENST00000519111 851 ntBASIC4.45□□□□□ -1.7
CDH6P55285 VTA1P2-201ENST00000520205 911 ntBASIC4.45□□□□□ -1.7
CDH6P55285 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH6P55285 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH6P55285 AC068831.4-201ENST00000556118 109 ntBASIC4.45□□□□□ -1.7
CDH6P55285 CYP4A43P-201ENST00000568156 121 ntBASIC4.45□□□□□ -1.7
CDH6P55285 MIR4700-201ENST00000578311 74 ntBASIC4.45□□□□□ -1.7
CDH6P55285 AL031666.3-201ENST00000609320 1006 ntBASIC4.45□□□□□ -1.7
CDH6P55285 AC087565.3-202ENST00000642085 1603 ntBASIC4.45□□□□□ -1.7
CDH6P55285 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH6P55285 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH6P55285 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH6P55285 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CDH6P55285 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH6P55285 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH6P55285 AP000756.2-201ENST00000624168 2567 ntBASIC4.44□□□□□ -1.7
CDH6P55285 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CDH6P55285 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
CDH6P55285 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.44□□□□□ -1.7
CDH6P55285 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH6P55285 AC007064.3-201ENST00000422608 359 ntBASIC4.44□□□□□ -1.7
CDH6P55285 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.44□□□□□ -1.7
CDH6P55285 DNAJC19P7-201ENST00000428811 344 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms