Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC095038.2-201ENST00000621464 1070 ntBASIC4.97□□□□□ -1.61
NUP98P52948 AC138965.3-201ENST00000623875 498 ntBASIC4.97□□□□□ -1.61
NUP98P52948 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP98P52948 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP98P52948 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP98P52948 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP98P52948 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP98P52948 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP98P52948 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NUP98P52948 SAMMSON-213ENST00000641336 1521 ntBASIC4.97□□□□□ -1.61
NUP98P52948 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
NUP98P52948 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP98P52948 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP98P52948 AC093591.2-201ENST00000565254 3843 ntBASIC4.97□□□□□ -1.61
NUP98P52948 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP98P52948 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP98P52948 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP98P52948 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
NUP98P52948 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP98P52948 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP98P52948 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP98P52948 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP98P52948 PSMC1P13-201ENST00000458195 985 ntBASIC4.97□□□□□ -1.61
NUP98P52948 ACTR3P3-201ENST00000480448 893 ntBASIC4.97□□□□□ -1.61
NUP98P52948 IGLV3-26-201ENST00000520756 302 ntBASIC4.97□□□□□ -1.61
NUP98P52948 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.97□□□□□ -1.61
NUP98P52948 AC010487.1-201ENST00000594408 1172 ntBASIC4.97□□□□□ -1.61
NUP98P52948 RNU1-30P-201ENST00000606575 163 ntBASIC4.97□□□□□ -1.61
NUP98P52948 MIR6075-201ENST00000620782 95 ntBASIC4.97□□□□□ -1.61
NUP98P52948 AC073530.2-201ENST00000623987 261 ntBASIC4.97□□□□□ -1.61
NUP98P52948 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP98P52948 AC009093.8-201ENST00000641769 292 ntBASIC4.97□□□□□ -1.61
NUP98P52948 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP98P52948 AC112198.2-201ENST00000426589 6996 ntBASIC4.97□□□□□ -1.61
NUP98P52948 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
NUP98P52948 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
NUP98P52948 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
NUP98P52948 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.61
NUP98P52948 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.96□□□□□ -1.61
NUP98P52948 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.61
NUP98P52948 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.96□□□□□ -1.61
NUP98P52948 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUP98P52948 PGBD4P8-201ENST00000412993 562 ntBASIC4.96□□□□□ -1.62
NUP98P52948 SEPT7P8-201ENST00000413308 775 ntBASIC4.96□□□□□ -1.62
NUP98P52948 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.96□□□□□ -1.62
NUP98P52948 RPL23AP83-201ENST00000434984 473 ntBASIC4.96□□□□□ -1.62
NUP98P52948 GEMIN8P3-201ENST00000445417 720 ntBASIC4.96□□□□□ -1.62
NUP98P52948 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.96□□□□□ -1.62
NUP98P52948 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.96□□□□□ -1.62
NUP98P52948 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.96□□□□□ -1.62
NUP98P52948 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.96□□□□□ -1.62
NUP98P52948 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.96□□□□□ -1.62
NUP98P52948 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.96□□□□□ -1.62
NUP98P52948 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.96□□□□□ -1.62
NUP98P52948 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUP98P52948 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUP98P52948 AL031595.2-201ENST00000624215 19071 ntBASIC4.96□□□□□ -1.62
NUP98P52948 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP98P52948 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP98P52948 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.95□□□□□ -1.62
NUP98P52948 SNORD35B-201ENST00000363660 87 ntBASIC4.95□□□□□ -1.62
NUP98P52948 RNU6-761P-201ENST00000384148 107 ntBASIC4.95□□□□□ -1.62
NUP98P52948 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NUP98P52948 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP98P52948 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP98P52948 OR5D2P-201ENST00000524390 911 ntBASIC4.95□□□□□ -1.62
NUP98P52948 AC079171.1-201ENST00000568788 914 ntBASIC4.95□□□□□ -1.62
NUP98P52948 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP98P52948 AC244100.1-202ENST00000621554 382 ntBASIC4.95□□□□□ -1.62
NUP98P52948 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NUP98P52948 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP98P52948 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP98P52948 A2MP1-204ENST00000566278 4130 ntBASIC4.95□□□□□ -1.62
NUP98P52948 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP98P52948 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NUP98P52948 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NUP98P52948 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP98P52948 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP98P52948 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP98P52948 Z97055.1-201ENST00000419730 712 ntBASIC4.95□□□□□ -1.62
NUP98P52948 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP98P52948 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP98P52948 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP98P52948 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP98P52948 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP98P52948 AC008694.2-201ENST00000517591 306 ntBASIC4.95□□□□□ -1.62
NUP98P52948 AP000619.3-201ENST00000535634 1127 ntBASIC4.95□□□□□ -1.62
NUP98P52948 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
NUP98P52948 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP98P52948 AC244505.7-201ENST00000599675 272 ntBASIC4.95□□□□□ -1.62
NUP98P52948 AC024220.1-201ENST00000603675 484 ntBASIC4.95□□□□□ -1.62
NUP98P52948 AC019176.2-201ENST00000611579 315 ntBASIC4.95□□□□□ -1.62
NUP98P52948 AL645927.2-201ENST00000618350 349 ntBASIC4.95□□□□□ -1.62
NUP98P52948 AC020978.9-201ENST00000624380 1141 ntBASIC4.95□□□□□ -1.62
NUP98P52948 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NUP98P52948 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NUP98P52948 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
NUP98P52948 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP98P52948 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP98P52948 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms