Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MAPK10-320ENST00000641462 6696 ntBASIC4.59□□□□□ -1.67
PDX1P52945 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.59□□□□□ -1.68
PDX1P52945 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PDX1P52945 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.59□□□□□ -1.68
PDX1P52945 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.59□□□□□ -1.68
PDX1P52945 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDX1P52945 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
PDX1P52945 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.58□□□□□ -1.68
PDX1P52945 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDX1P52945 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDX1P52945 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDX1P52945 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDX1P52945 SMG1P6-201ENST00000532337 2930 ntBASIC4.58□□□□□ -1.68
PDX1P52945 MAPK10-263ENST00000641052 4307 ntBASIC4.58□□□□□ -1.68
PDX1P52945 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.58□□□□□ -1.68
PDX1P52945 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDX1P52945 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PDX1P52945 AC002524.1-201ENST00000411687 547 ntBASIC4.58□□□□□ -1.68
PDX1P52945 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.58□□□□□ -1.68
PDX1P52945 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.58□□□□□ -1.68
PDX1P52945 AC004975.1-201ENST00000428733 208 ntBASIC4.58□□□□□ -1.68
PDX1P52945 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.58□□□□□ -1.68
PDX1P52945 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.58□□□□□ -1.68
PDX1P52945 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.58□□□□□ -1.68
PDX1P52945 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.58□□□□□ -1.68
PDX1P52945 HMGB1P26-201ENST00000452520 628 ntBASIC4.58□□□□□ -1.68
PDX1P52945 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.58□□□□□ -1.68
PDX1P52945 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.58□□□□□ -1.68
PDX1P52945 AC073358.1-201ENST00000505671 684 ntBASIC4.58□□□□□ -1.68
PDX1P52945 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.58□□□□□ -1.68
PDX1P52945 RN7SKP21-201ENST00000516503 220 ntBASIC4.58□□□□□ -1.68
PDX1P52945 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.58□□□□□ -1.68
PDX1P52945 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.58□□□□□ -1.68
PDX1P52945 OR8A2P-201ENST00000528631 952 ntBASIC4.58□□□□□ -1.68
PDX1P52945 AP003066.2-201ENST00000529375 555 ntBASIC4.58□□□□□ -1.68
PDX1P52945 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDX1P52945 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PDX1P52945 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.58□□□□□ -1.68
PDX1P52945 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.58□□□□□ -1.68
PDX1P52945 AC090666.1-201ENST00000578241 445 ntBASIC4.58□□□□□ -1.68
PDX1P52945 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.58□□□□□ -1.68
PDX1P52945 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.58□□□□□ -1.68
PDX1P52945 AL121932.1-201ENST00000605542 214 ntBASIC4.58□□□□□ -1.68
PDX1P52945 AC026790.2-201ENST00000606282 430 ntBASIC4.58□□□□□ -1.68
PDX1P52945 AC011374.2-201ENST00000607135 526 ntBASIC4.58□□□□□ -1.68
PDX1P52945 AC097504.2-201ENST00000608088 454 ntBASIC4.58□□□□□ -1.68
PDX1P52945 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.58□□□□□ -1.68
PDX1P52945 AC078880.5-201ENST00000617845 421 ntBASIC4.58□□□□□ -1.68
PDX1P52945 AC007275.1-201ENST00000621243 671 ntBASIC4.58□□□□□ -1.68
PDX1P52945 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.58□□□□□ -1.68
PDX1P52945 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDX1P52945 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDX1P52945 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PDX1P52945 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDX1P52945 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDX1P52945 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDX1P52945 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.58□□□□□ -1.68
PDX1P52945 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.57□□□□□ -1.68
PDX1P52945 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDX1P52945 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDX1P52945 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PDX1P52945 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PDX1P52945 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PDX1P52945 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PDX1P52945 AC017007.4-201ENST00000503353 1352 ntBASIC4.57□□□□□ -1.68
PDX1P52945 SNORD56.4-201ENST00000363883 71 ntBASIC4.57□□□□□ -1.68
PDX1P52945 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.57□□□□□ -1.68
PDX1P52945 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDX1P52945 OR6K4P-201ENST00000423179 955 ntBASIC4.57□□□□□ -1.68
PDX1P52945 OR2AH1P-201ENST00000425717 928 ntBASIC4.57□□□□□ -1.68
PDX1P52945 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.57□□□□□ -1.68
PDX1P52945 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.57□□□□□ -1.68
PDX1P52945 MTND2P2-201ENST00000434633 945 ntBASIC4.57□□□□□ -1.68
PDX1P52945 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.57□□□□□ -1.68
PDX1P52945 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.57□□□□□ -1.68
PDX1P52945 MTND2P28-201ENST00000457540 1044 ntBASIC4.57□□□□□ -1.68
PDX1P52945 AC020898.1-201ENST00000474167 787 ntBASIC4.57□□□□□ -1.68
PDX1P52945 RPL7AP10-201ENST00000481016 791 ntBASIC4.57□□□□□ -1.68
PDX1P52945 AC090686.1-201ENST00000481577 749 ntBASIC4.57□□□□□ -1.68
PDX1P52945 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.57□□□□□ -1.68
PDX1P52945 HMGB3P16-201ENST00000508037 287 ntBASIC4.57□□□□□ -1.68
PDX1P52945 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.57□□□□□ -1.68
PDX1P52945 RNA5SP249-201ENST00000516127 99 ntBASIC4.57□□□□□ -1.68
PDX1P52945 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.57□□□□□ -1.68
PDX1P52945 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.57□□□□□ -1.68
PDX1P52945 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PDX1P52945 AC122134.1-201ENST00000565664 1104 ntBASIC4.57□□□□□ -1.68
PDX1P52945 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.57□□□□□ -1.68
PDX1P52945 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.57□□□□□ -1.68
PDX1P52945 CYCSP40-201ENST00000575927 294 ntBASIC4.57□□□□□ -1.68
PDX1P52945 AC126365.2-201ENST00000580630 379 ntBASIC4.57□□□□□ -1.68
PDX1P52945 MIR4472-2-201ENST00000582069 67 ntBASIC4.57□□□□□ -1.68
PDX1P52945 KPNA2P3-201ENST00000584190 848 ntBASIC4.57□□□□□ -1.68
PDX1P52945 AC006272.2-201ENST00000594725 163 ntBASIC4.57□□□□□ -1.68
PDX1P52945 AC008759.3-201ENST00000613300 508 ntBASIC4.57□□□□□ -1.68
PDX1P52945 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDX1P52945 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.57□□□□□ -1.68
PDX1P52945 AC004808.1-201ENST00000627671 721 ntBASIC4.57□□□□□ -1.68
PDX1P52945 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDX1P52945 AC099654.8-201ENST00000637757 681 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms