Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.52□□□□□ -1.69
TNFSF9P41273 RPL23AP46-201ENST00000438548 490 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 AC114755.5-201ENST00000447760 831 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF9P41273 AL591363.1-201ENST00000450091 483 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 RPS7P7-201ENST00000463499 571 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 AL133372.1-201ENST00000493565 745 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF9P41273 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF9P41273 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF9P41273 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.52□□□□□ -1.69
TNFSF9P41273 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.52□□□□□ -1.69
TNFSF9P41273 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF9P41273 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.52□□□□□ -1.69
TNFSF9P41273 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.52□□□□□ -1.69
TNFSF9P41273 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.52□□□□□ -1.69
TNFSF9P41273 AC064801.1-201ENST00000612025 407 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 MAPK10-320ENST00000641462 6696 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
TNFSF9P41273 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
TNFSF9P41273 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TNFSF9P41273 AC017104.4-201ENST00000636283 1592 ntBASIC4.52□□□□□ -1.69
TNFSF9P41273 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.52□□□□□ -1.69
TNFSF9P41273 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TNFSF9P41273 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF9P41273 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TNFSF9P41273 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
TNFSF9P41273 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFSF9P41273 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TNFSF9P41273 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TNFSF9P41273 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF9P41273 AC116667.1-201ENST00000604855 2072 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 MIR372-201ENST00000362225 67 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TNFSF9P41273 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.51□□□□□ -1.69
TNFSF9P41273 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF9P41273 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF9P41273 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF9P41273 MRPL50P1-201ENST00000431951 384 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 KCTD10P1-201ENST00000434203 625 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF9P41273 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF9P41273 AC006011.1-201ENST00000442758 349 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 MTCYBP14-201ENST00000457471 715 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 KRT19P6-201ENST00000510983 209 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF9P41273 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF9P41273 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF9P41273 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.51□□□□□ -1.69
TNFSF9P41273 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.51□□□□□ -1.69
TNFSF9P41273 AC124856.1-201ENST00000600819 896 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 VN1R85P-201ENST00000601587 426 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 AC004241.3-201ENST00000611728 517 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 AC024941.1-201ENST00000612250 334 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 SNX18P1Y-201ENST00000616231 511 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.51□□□□□ -1.69
TNFSF9P41273 RNA5SP196-201ENST00000625967 102 ntBASIC4.51□□□□□ -1.69
TNFSF9P41273 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF9P41273 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TNFSF9P41273 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF9P41273 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF9P41273 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TNFSF9P41273 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFSF9P41273 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF9P41273 AC107021.2-201ENST00000567714 2095 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF9P41273 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFSF9P41273 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF9P41273 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF9P41273 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TNFSF9P41273 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TNFSF9P41273 AC104297.1-201ENST00000393779 870 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 RN7SKP199-201ENST00000410325 305 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 RN7SKP27-201ENST00000410684 333 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF9P41273 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFSF9P41273 PDSS1P1-201ENST00000422953 1114 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 YY1P1-201ENST00000427625 668 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 HMGB3P10-201ENST00000434734 572 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 MAPRE1P3-201ENST00000435438 796 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF9P41273 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFSF9P41273 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFSF9P41273 RN7SL604P-201ENST00000492589 296 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF9P41273 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.5□□□□□ -1.69
TNFSF9P41273 NPM1P52-201ENST00000518264 846 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF9P41273 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.5□□□□□ -1.69
TNFSF9P41273 AC063950.1-201ENST00000552036 308 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.5□□□□□ -1.69
TNFSF9P41273 MTND2P13-201ENST00000577438 1039 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 AL161637.1-201ENST00000622380 412 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 AC138907.10-201ENST00000623708 983 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 AC010608.2-201ENST00000624830 470 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
TNFSF9P41273 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms