Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL359922.3-201ENST00000624779 1670 ntBASIC4.1□□□□□ -1.75
RFC3P40938 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFC3P40938 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RFC3P40938 DHX9P1-201ENST00000436565 3076 ntBASIC4.1□□□□□ -1.75
RFC3P40938 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
RFC3P40938 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFC3P40938 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFC3P40938 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFC3P40938 RNU1-130P-201ENST00000363930 160 ntBASIC4.1□□□□□ -1.75
RFC3P40938 RNA5SP479-201ENST00000364858 117 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AC093719.1-202ENST00000392735 373 ntBASIC4.1□□□□□ -1.75
RFC3P40938 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.1□□□□□ -1.75
RFC3P40938 RNA5SP104-201ENST00000410989 118 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AC004552.1-201ENST00000419089 348 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AC007064.3-201ENST00000422608 359 ntBASIC4.1□□□□□ -1.75
RFC3P40938 OR6K4P-201ENST00000423179 955 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AC023141.6-201ENST00000429418 337 ntBASIC4.1□□□□□ -1.75
RFC3P40938 NMNAT1P2-201ENST00000435192 860 ntBASIC4.1□□□□□ -1.75
RFC3P40938 PHBP16-201ENST00000446318 950 ntBASIC4.1□□□□□ -1.75
RFC3P40938 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.1□□□□□ -1.75
RFC3P40938 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.1□□□□□ -1.75
RFC3P40938 RPS26P3-201ENST00000470205 348 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AL161747.1-201ENST00000480068 358 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AC090543.2-201ENST00000483963 348 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AC004057.1-201ENST00000485827 348 ntBASIC4.1□□□□□ -1.75
RFC3P40938 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.1□□□□□ -1.75
RFC3P40938 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.1□□□□□ -1.75
RFC3P40938 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.1□□□□□ -1.75
RFC3P40938 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.1□□□□□ -1.75
RFC3P40938 AC011477.5-201ENST00000586571 259 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AC068790.5-201ENST00000602741 355 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AL139395.1-201ENST00000603662 160 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.1□□□□□ -1.75
RFC3P40938 AC114781.5-201ENST00000615297 108 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AC016717.3-201ENST00000624730 554 ntBASIC4.1□□□□□ -1.75
RFC3P40938 AP000843.1-201ENST00000624880 701 ntBASIC4.1□□□□□ -1.75
RFC3P40938 BMS1P21-201ENST00000634565 365 ntBASIC4.1□□□□□ -1.75
RFC3P40938 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RFC3P40938 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
RFC3P40938 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFC3P40938 AC090017.1-201ENST00000548612 1779 ntBASIC4.09□□□□□ -1.75
RFC3P40938 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFC3P40938 CASC19-284ENST00000642142 1868 ntBASIC4.09□□□□□ -1.75
RFC3P40938 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC3P40938 AL356489.2-201ENST00000566968 3528 ntBASIC4.09□□□□□ -1.75
RFC3P40938 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFC3P40938 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFC3P40938 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
RFC3P40938 SNORD65-201ENST00000391079 73 ntBASIC4.09□□□□□ -1.75
RFC3P40938 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RFC3P40938 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.09□□□□□ -1.75
RFC3P40938 EIF4A1P3-201ENST00000411521 244 ntBASIC4.09□□□□□ -1.75
RFC3P40938 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.09□□□□□ -1.75
RFC3P40938 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC3P40938 CASKP1-201ENST00000412870 582 ntBASIC4.09□□□□□ -1.75
RFC3P40938 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFC3P40938 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC3P40938 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.09□□□□□ -1.75
RFC3P40938 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC3P40938 NPM1P26-201ENST00000426339 738 ntBASIC4.09□□□□□ -1.75
RFC3P40938 SKP1P3-201ENST00000429280 487 ntBASIC4.09□□□□□ -1.75
RFC3P40938 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.09□□□□□ -1.75
RFC3P40938 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC3P40938 TDGF1P1-201ENST00000445734 527 ntBASIC4.09□□□□□ -1.75
RFC3P40938 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC3P40938 RPL31P20-201ENST00000449593 360 ntBASIC4.09□□□□□ -1.75
RFC3P40938 FCF1P7-201ENST00000451185 558 ntBASIC4.09□□□□□ -1.75
RFC3P40938 C1DP3-201ENST00000455013 423 ntBASIC4.09□□□□□ -1.75
RFC3P40938 HMGN1P8-201ENST00000463578 288 ntBASIC4.09□□□□□ -1.75
RFC3P40938 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC3P40938 STRADBP1-201ENST00000478954 1281 ntBASIC4.09□□□□□ -1.75
RFC3P40938 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.09□□□□□ -1.75
RFC3P40938 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFC3P40938 AC025445.1-201ENST00000502728 300 ntBASIC4.09□□□□□ -1.75
RFC3P40938 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC3P40938 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC3P40938 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC3P40938 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.09□□□□□ -1.75
RFC3P40938 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC3P40938 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
RFC3P40938 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.09□□□□□ -1.75
RFC3P40938 AC069240.1-201ENST00000548774 375 ntBASIC4.09□□□□□ -1.75
RFC3P40938 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.09□□□□□ -1.75
RFC3P40938 ADAM3B-201ENST00000569937 840 ntBASIC4.09□□□□□ -1.75
RFC3P40938 MTND6P33-201ENST00000571794 183 ntBASIC4.09□□□□□ -1.75
RFC3P40938 AP001160.4-201ENST00000596971 382 ntBASIC4.09□□□□□ -1.75
RFC3P40938 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC3P40938 AP003497.2-201ENST00000624220 967 ntBASIC4.09□□□□□ -1.75
RFC3P40938 AC092159.4-201ENST00000624944 550 ntBASIC4.09□□□□□ -1.75
RFC3P40938 AC010329.2-201ENST00000595195 2737 ntBASIC4.09□□□□□ -1.75
RFC3P40938 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFC3P40938 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC3P40938 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFC3P40938 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RFC3P40938 AC092079.1-201ENST00000558620 1985 ntBASIC4.09□□□□□ -1.76
RFC3P40938 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFC3P40938 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFC3P40938 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.08□□□□□ -1.76
RFC3P40938 AC008033.1-201ENST00000216407 1162 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms