Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.41□□□□□ -1.7
FDFT1P37268 OR5M7P-201ENST00000526140 972 ntBASIC4.41□□□□□ -1.7
FDFT1P37268 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.41□□□□□ -1.7
FDFT1P37268 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.41□□□□□ -1.7
FDFT1P37268 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.41□□□□□ -1.7
FDFT1P37268 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
FDFT1P37268 AL109766.1-201ENST00000555080 552 ntBASIC4.41□□□□□ -1.7
FDFT1P37268 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.41□□□□□ -1.7
FDFT1P37268 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.41□□□□□ -1.7
FDFT1P37268 AC090312.1-201ENST00000580637 348 ntBASIC4.41□□□□□ -1.7
FDFT1P37268 AC025175.1-201ENST00000606482 759 ntBASIC4.41□□□□□ -1.7
FDFT1P37268 AC012409.3-201ENST00000611343 981 ntBASIC4.41□□□□□ -1.7
FDFT1P37268 AL121873.1-201ENST00000616013 524 ntBASIC4.41□□□□□ -1.7
FDFT1P37268 AC007546.1-201ENST00000619452 559 ntBASIC4.41□□□□□ -1.7
FDFT1P37268 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.41□□□□□ -1.7
FDFT1P37268 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.41□□□□□ -1.7
FDFT1P37268 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
FDFT1P37268 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
FDFT1P37268 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.41□□□□□ -1.7
FDFT1P37268 AC011266.1-201ENST00000624119 3569 ntBASIC4.41□□□□□ -1.7
FDFT1P37268 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.41□□□□□ -1.7
FDFT1P37268 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
FDFT1P37268 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.41□□□□□ -1.7
FDFT1P37268 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
FDFT1P37268 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FDFT1P37268 AL133243.3-201ENST00000617415 3004 ntBASIC4.4□□□□□ -1.7
FDFT1P37268 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FDFT1P37268 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
FDFT1P37268 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.4□□□□□ -1.7
FDFT1P37268 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.4□□□□□ -1.7
FDFT1P37268 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.4□□□□□ -1.7
FDFT1P37268 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
FDFT1P37268 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FDFT1P37268 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.4□□□□□ -1.71
FDFT1P37268 AC079741.1-201ENST00000321498 212 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 RN7SKP103-201ENST00000363848 320 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FDFT1P37268 SNORA11F-201ENST00000408237 128 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 RN7SKP222-201ENST00000410651 315 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 TMSB10P2-201ENST00000416049 131 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.4□□□□□ -1.71
FDFT1P37268 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.4□□□□□ -1.71
FDFT1P37268 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.4□□□□□ -1.71
FDFT1P37268 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.4□□□□□ -1.71
FDFT1P37268 RN7SL610P-201ENST00000463845 291 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 OR52A4P-201ENST00000472867 958 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.4□□□□□ -1.71
FDFT1P37268 AC010374.1-201ENST00000503762 1237 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.4□□□□□ -1.71
FDFT1P37268 AC108471.1-201ENST00000513977 287 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 NPM1P6-201ENST00000521088 871 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 AP006289.1-201ENST00000538089 277 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 AC006064.5-201ENST00000541782 248 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.4□□□□□ -1.71
FDFT1P37268 MIR432-201ENST00000606207 94 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 uc_338.13-201ENST00000618243 179 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 RPL23AP61-201ENST00000623642 466 ntBASIC4.4□□□□□ -1.71
FDFT1P37268 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FDFT1P37268 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FDFT1P37268 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FDFT1P37268 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FDFT1P37268 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
FDFT1P37268 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.4□□□□□ -1.71
FDFT1P37268 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FDFT1P37268 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FDFT1P37268 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FDFT1P37268 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
FDFT1P37268 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.39□□□□□ -1.71
FDFT1P37268 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FDFT1P37268 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
FDFT1P37268 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.39□□□□□ -1.71
FDFT1P37268 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FDFT1P37268 RNU6-670P-201ENST00000364312 104 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 GCNT6-201ENST00000379591 934 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 RNU6-891P-201ENST00000384280 111 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FDFT1P37268 RPS3AP23-201ENST00000401762 784 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.39□□□□□ -1.71
FDFT1P37268 AC019050.1-201ENST00000418508 492 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 AL356387.2-201ENST00000422272 243 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 RPL12P34-201ENST00000424532 479 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 MTCO1P45-201ENST00000431457 267 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 VN1R48P-201ENST00000448149 1036 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 RNU6-1218P-201ENST00000458990 108 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.39□□□□□ -1.71
FDFT1P37268 AC104164.2-201ENST00000496953 495 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 PPM1AP1-201ENST00000502740 1135 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FDFT1P37268 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.39□□□□□ -1.71
FDFT1P37268 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.39□□□□□ -1.71
FDFT1P37268 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.39□□□□□ -1.71
FDFT1P37268 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.39□□□□□ -1.71
FDFT1P37268 PDCD5P1-201ENST00000543528 309 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.39□□□□□ -1.71
FDFT1P37268 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.39□□□□□ -1.71
FDFT1P37268 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.39□□□□□ -1.71
FDFT1P37268 RMST_9.1-201ENST00000619945 193 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 AC002044.3-201ENST00000623314 541 ntBASIC4.39□□□□□ -1.71
FDFT1P37268 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms