Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL4A5P29400 AP004289.2-201ENST00000444413 1457 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
COL4A5P29400 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.79□□□□□ -1.64
COL4A5P29400 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
COL4A5P29400 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL4A5P29400 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL4A5P29400 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.79□□□□□ -1.64
COL4A5P29400 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.79□□□□□ -1.64
COL4A5P29400 SOD2P1-201ENST00000396543 562 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 RPS29P4-201ENST00000414733 161 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.79□□□□□ -1.64
COL4A5P29400 HSPD1P21-201ENST00000436541 245 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 AC083863.1-201ENST00000438811 231 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 CYCSP32-201ENST00000440548 321 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 AC106707.2-201ENST00000484182 374 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 AL358832.1-201ENST00000497800 389 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.79□□□□□ -1.64
COL4A5P29400 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.79□□□□□ -1.64
COL4A5P29400 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.79□□□□□ -1.64
COL4A5P29400 AC007458.1-201ENST00000542812 373 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 AC063950.1-201ENST00000552036 308 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 DPPA3P2-201ENST00000553589 478 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
COL4A5P29400 SNX6P1-201ENST00000601728 1224 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 QTRT1P1-201ENST00000604344 1078 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL4A5P29400 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.79□□□□□ -1.64
COL4A5P29400 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL4A5P29400 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COL4A5P29400 MTCO1P12-201ENST00000414273 1543 ntBASIC4.79□□□□□ -1.64
COL4A5P29400 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
COL4A5P29400 PRO1804-201ENST00000623780 2050 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A5P29400 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A5P29400 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
COL4A5P29400 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A5P29400 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A5P29400 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A5P29400 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
COL4A5P29400 RNA5SP72-201ENST00000364442 117 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 RNA5SP22-201ENST00000365393 109 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 UBTFL3-201ENST00000418934 1024 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.78□□□□□ -1.64
COL4A5P29400 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.78□□□□□ -1.64
COL4A5P29400 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.78□□□□□ -1.64
COL4A5P29400 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.78□□□□□ -1.64
COL4A5P29400 AL133244.1-201ENST00000456007 258 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 UBTFL6-201ENST00000477929 1024 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.78□□□□□ -1.64
COL4A5P29400 MIR5195-201ENST00000583555 115 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 AC090246.1-201ENST00000616499 426 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 AP001002.2-201ENST00000625137 386 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 AC055839.1-201ENST00000634467 498 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC4.78□□□□□ -1.64
COL4A5P29400 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A5P29400 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
COL4A5P29400 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A5P29400 AL513548.1-201ENST00000562904 1724 ntBASIC4.78□□□□□ -1.64
COL4A5P29400 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL4A5P29400 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.77□□□□□ -1.65
COL4A5P29400 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A5P29400 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
COL4A5P29400 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
COL4A5P29400 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A5P29400 RPS26P2-201ENST00000440331 348 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.77□□□□□ -1.65
COL4A5P29400 RPS4XP12-201ENST00000461747 709 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 WBP1LP4-201ENST00000505043 344 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.77□□□□□ -1.65
COL4A5P29400 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.77□□□□□ -1.65
COL4A5P29400 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A5P29400 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
COL4A5P29400 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
COL4A5P29400 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A5P29400 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL4A5P29400 RN7SKP177-201ENST00000410567 355 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 MTND2P15-201ENST00000418575 892 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 AL591419.1-201ENST00000427423 339 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 AL445433.1-201ENST00000457507 257 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 SETP14-201ENST00000497538 873 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 CAB39P1-201ENST00000502277 460 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.77□□□□□ -1.65
COL4A5P29400 AL031985.2-201ENST00000600955 480 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 RNU1-30P-201ENST00000606575 163 ntBASIC4.77□□□□□ -1.65
COL4A5P29400 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.77□□□□□ -1.65
COL4A5P29400 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A5P29400 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A5P29400 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.76□□□□□ -1.65
COL4A5P29400 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC4.76□□□□□ -1.65
COL4A5P29400 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A5P29400 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL4A5P29400 MIR634-201ENST00000385208 97 ntBASIC4.76□□□□□ -1.65
COL4A5P29400 RPL7P60-201ENST00000397636 735 ntBASIC4.76□□□□□ -1.65
COL4A5P29400 TCEA1P2-201ENST00000420496 906 ntBASIC4.76□□□□□ -1.65
COL4A5P29400 HSFY1P1-201ENST00000423928 1178 ntBASIC4.76□□□□□ -1.65
COL4A5P29400 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.76□□□□□ -1.65
COL4A5P29400 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.76□□□□□ -1.65
COL4A5P29400 AC005000.2-201ENST00000605468 310 ntBASIC4.76□□□□□ -1.65
COL4A5P29400 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms