Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC234782.5-201ENST00000617723 324 ntBASIC4.77□□□□□ -1.65
ERCC2P18074 AP000720.1-201ENST00000625091 483 ntBASIC4.77□□□□□ -1.65
ERCC2P18074 U3.53-201ENST00000628922 216 ntBASIC4.77□□□□□ -1.65
ERCC2P18074 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
ERCC2P18074 SCN1A-220ENST00000641603 12506 ntBASIC4.77□□□□□ -1.65
ERCC2P18074 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC2P18074 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ERCC2P18074 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.77□□□□□ -1.65
ERCC2P18074 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERCC2P18074 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ERCC2P18074 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
ERCC2P18074 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ERCC2P18074 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ERCC2P18074 AL391684.1-202ENST00000641293 1636 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC2P18074 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ERCC2P18074 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.76□□□□□ -1.65
ERCC2P18074 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC2P18074 RNU6-146P-201ENST00000384602 108 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ERCC2P18074 MIR298-201ENST00000401212 88 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 AL359643.1-201ENST00000404109 423 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 AL512430.2-201ENST00000406786 339 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 HMGB3P31-201ENST00000413333 595 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 AL445183.3-201ENST00000414168 502 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 RBMY2KP-201ENST00000418221 992 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 RPL12P34-201ENST00000424532 479 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 MTCO2P1-201ENST00000424648 477 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 RPL21P43-201ENST00000425440 472 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC2P18074 DYNLL1P7-201ENST00000429273 258 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 RPL34P6-201ENST00000432390 345 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 MTND6P18-201ENST00000439477 513 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC2P18074 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 ISCUP1-201ENST00000454451 448 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 MTCO1P18-201ENST00000455518 1419 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 SCARNA10-201ENST00000459255 330 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 RPL23AP37-201ENST00000479658 549 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 RWDD4P1-201ENST00000488019 565 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
ERCC2P18074 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC2P18074 AC021242.1-201ENST00000507315 2035 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 AC007016.1-201ENST00000512110 244 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC2P18074 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC2P18074 IGKV1-32-201ENST00000519290 311 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 SMARCE1P4-201ENST00000523647 241 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC2P18074 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC2P18074 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.76□□□□□ -1.65
ERCC2P18074 MIR4270-201ENST00000581799 70 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.76□□□□□ -1.65
ERCC2P18074 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.76□□□□□ -1.65
ERCC2P18074 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.76□□□□□ -1.65
ERCC2P18074 AC090948.2-201ENST00000607363 564 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC2P18074 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.76□□□□□ -1.65
ERCC2P18074 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 U6.107-201ENST00000637108 79 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 AP001642.1-201ENST00000624727 2117 ntBASIC4.76□□□□□ -1.65
ERCC2P18074 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ERCC2P18074 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.76□□□□□ -1.65
ERCC2P18074 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ERCC2P18074 AL137100.1-201ENST00000556703 1620 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC2P18074 MFSD8-213ENST00000641134 1327 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 AC126323.6-202ENST00000568092 3511 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ERCC2P18074 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
ERCC2P18074 MTCO1P4-201ENST00000520516 1409 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
ERCC2P18074 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ERCC2P18074 Z98745.1-201ENST00000402553 494 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 MIR1303-201ENST00000408625 86 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 RN7SKP106-201ENST00000410832 272 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 AC019050.1-201ENST00000418508 492 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 Z74021.1-201ENST00000423610 407 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 UBE2V1P6-201ENST00000430840 422 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 RPL12P28-201ENST00000430852 489 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 RPS20P1-201ENST00000434853 354 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.75□□□□□ -1.65
ERCC2P18074 MOB1AP2-201ENST00000446060 614 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 AC239809.1-201ENST00000450470 217 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.75□□□□□ -1.65
ERCC2P18074 RNA5SP103-201ENST00000459503 118 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 RPL12P20-201ENST00000475538 479 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 AL161747.1-201ENST00000480068 358 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 MTND4LP2-201ENST00000502312 285 ntBASIC4.75□□□□□ -1.65
ERCC2P18074 AC106806.2-201ENST00000509365 500 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms