Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTLA4P16410 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.69□□□□□ -1.82
CTLA4P16410 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.69□□□□□ -1.82
CTLA4P16410 MTCO1P22-201ENST00000604619 1360 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTLA4P16410 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CTLA4P16410 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTLA4P16410 AC019155.1-201ENST00000382242 574 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CTLA4P16410 RNU6-167P-201ENST00000384292 106 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CTLA4P16410 AC093719.1-202ENST00000392735 373 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTLA4P16410 MIR937-201ENST00000401271 86 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 RPL37P18-201ENST00000411602 243 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 TRIM60P17-201ENST00000415181 719 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.69□□□□□ -1.82
CTLA4P16410 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.69□□□□□ -1.82
CTLA4P16410 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.69□□□□□ -1.82
CTLA4P16410 RPL12P34-201ENST00000424532 479 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 RPL23AP46-201ENST00000438548 490 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 CBX1P1-201ENST00000440184 427 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.69□□□□□ -1.82
CTLA4P16410 AC010469.1-201ENST00000463864 576 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 AC011276.1-201ENST00000469688 323 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CTLA4P16410 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.69□□□□□ -1.82
CTLA4P16410 AC113430.1-201ENST00000506872 718 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 KCTD9P2-201ENST00000512203 1013 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.69□□□□□ -1.82
CTLA4P16410 AC105233.3-201ENST00000531125 744 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.69□□□□□ -1.82
CTLA4P16410 TVP23BP1-201ENST00000557500 617 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.69□□□□□ -1.82
CTLA4P16410 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.69□□□□□ -1.82
CTLA4P16410 AC022655.2-201ENST00000577280 318 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 MIR4330-201ENST00000579077 105 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 AL161729.3-201ENST00000603533 673 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 AL121873.1-201ENST00000616013 524 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 AC022960.2-201ENST00000616300 666 ntBASIC3.69□□□□□ -1.82
CTLA4P16410 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.69□□□□□ -1.82
CTLA4P16410 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.69□□□□□ -1.82
CTLA4P16410 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTLA4P16410 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CTLA4P16410 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CTLA4P16410 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CTLA4P16410 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
CTLA4P16410 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.69□□□□□ -1.82
CTLA4P16410 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CTLA4P16410 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CTLA4P16410 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTLA4P16410 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTLA4P16410 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CTLA4P16410 AC097504.1-201ENST00000515103 2415 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CTLA4P16410 RNU4-39P-201ENST00000362455 127 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 RNA5SP509-201ENST00000364577 119 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.68□□□□□ -1.82
CTLA4P16410 U3.22-201ENST00000391120 215 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AL136131.1-201ENST00000406079 803 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 RNA5SP104-201ENST00000410989 118 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AC011933.1-201ENST00000413334 321 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AC245028.1-201ENST00000423259 256 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.68□□□□□ -1.82
CTLA4P16410 RPS26P47-201ENST00000427219 348 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AC068287.1-201ENST00000430283 295 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.68□□□□□ -1.82
CTLA4P16410 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.68□□□□□ -1.82
CTLA4P16410 AC116533.1-201ENST00000459748 321 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 RPS20P4-201ENST00000461659 355 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 RN7SL459P-201ENST00000481078 302 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AC041039.1-201ENST00000485656 536 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AC025445.1-201ENST00000502728 300 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.68□□□□□ -1.82
CTLA4P16410 AC093824.1-201ENST00000508796 343 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.68□□□□□ -1.82
CTLA4P16410 OR51K1P-201ENST00000510214 950 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 IGHV3-63-201ENST00000518422 341 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 NPM1P6-201ENST00000521088 871 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CTLA4P16410 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.68□□□□□ -1.82
CTLA4P16410 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.68□□□□□ -1.82
CTLA4P16410 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.68□□□□□ -1.82
CTLA4P16410 AC068790.4-201ENST00000602474 263 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AL356218.2-201ENST00000605264 187 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AC095038.2-201ENST00000621464 1070 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 AP005264.7-201ENST00000625003 745 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 ERCC6-202ENST00000374127 1782 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CTLA4P16410 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTLA4P16410 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CTLA4P16410 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CTLA4P16410 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.68□□□□□ -1.82
CTLA4P16410 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CTLA4P16410 MARK2P15-201ENST00000432204 2186 ntBASIC3.68□□□□□ -1.82
CTLA4P16410 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CTLA4P16410 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.67□□□□□ -1.82
CTLA4P16410 HSPD1P11-201ENST00000508643 1702 ntBASIC3.67□□□□□ -1.82
CTLA4P16410 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CTLA4P16410 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms