Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL6A2P12110 AC083899.1-201ENST00000454465 3819 ntBASIC5.71□□□□□ -1.49
COL6A2P12110 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
COL6A2P12110 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
COL6A2P12110 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
COL6A2P12110 TCP11X1-202ENST00000622971 1372 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL6A2P12110 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
COL6A2P12110 VPS35P1-201ENST00000563400 1518 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL6A2P12110 RNU1-146P-201ENST00000364015 165 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 RNA5SP232-201ENST00000364144 119 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 RNU6-374P-201ENST00000364146 108 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 RNU6-660P-201ENST00000364566 109 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.71□□□□□ -1.5
COL6A2P12110 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL6A2P12110 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.71□□□□□ -1.5
COL6A2P12110 OR8G2P-201ENST00000412796 908 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.71□□□□□ -1.5
COL6A2P12110 AL139158.1-201ENST00000424719 340 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.71□□□□□ -1.5
COL6A2P12110 RPS24P8-201ENST00000431490 402 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.71□□□□□ -1.5
COL6A2P12110 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.71□□□□□ -1.5
COL6A2P12110 MTND1P28-201ENST00000435623 950 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 UBE2FP3-201ENST00000436366 524 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.71□□□□□ -1.5
COL6A2P12110 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL6A2P12110 RBMX2P4-201ENST00000441256 376 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 RPL5P7-201ENST00000444235 813 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 EPS15P1-201ENST00000448836 336 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 DNAJC19P1-201ENST00000455312 319 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AC096741.1-201ENST00000472250 846 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL6A2P12110 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 RN7SL568P-201ENST00000493069 298 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.71□□□□□ -1.5
COL6A2P12110 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.71□□□□□ -1.5
COL6A2P12110 AC109471.1-201ENST00000511631 612 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.71□□□□□ -1.5
COL6A2P12110 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.71□□□□□ -1.5
COL6A2P12110 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.71□□□□□ -1.5
COL6A2P12110 OR8G3P-201ENST00000533406 921 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.71□□□□□ -1.5
COL6A2P12110 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.71□□□□□ -1.5
COL6A2P12110 AC137627.1-201ENST00000545761 289 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AC004217.3-201ENST00000551552 878 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AC087883.1-201ENST00000551882 391 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.71□□□□□ -1.5
COL6A2P12110 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.71□□□□□ -1.5
COL6A2P12110 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.71□□□□□ -1.5
COL6A2P12110 PCMTD1P2-201ENST00000565017 355 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.71□□□□□ -1.5
COL6A2P12110 COX6CP7-201ENST00000597056 208 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AL606834.2-201ENST00000602954 668 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.71□□□□□ -1.5
COL6A2P12110 AC109347.2-201ENST00000610220 349 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 Z95327.3-201ENST00000610385 572 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.71□□□□□ -1.5
COL6A2P12110 AL122125.1-201ENST00000616999 600 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 AL357080.1-201ENST00000617394 239 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.71□□□□□ -1.5
COL6A2P12110 AC092650.2-201ENST00000619984 902 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.71□□□□□ -1.5
COL6A2P12110 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL6A2P12110 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL6A2P12110 MFSD8-219ENST00000641228 2559 ntBASIC5.71□□□□□ -1.5
COL6A2P12110 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL6A2P12110 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
COL6A2P12110 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL6A2P12110 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL6A2P12110 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL6A2P12110 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.71□□□□□ -1.5
COL6A2P12110 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.71□□□□□ -1.5
COL6A2P12110 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.71□□□□□ -1.5
COL6A2P12110 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.71□□□□□ -1.5
COL6A2P12110 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL6A2P12110 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.7□□□□□ -1.5
COL6A2P12110 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.7□□□□□ -1.5
COL6A2P12110 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL6A2P12110 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.7□□□□□ -1.5
COL6A2P12110 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
COL6A2P12110 CR383658.2-201ENST00000547576 1525 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
COL6A2P12110 RPL21P132-201ENST00000331267 462 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL6A2P12110 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.7□□□□□ -1.5
COL6A2P12110 RNU6-582P-201ENST00000362989 107 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 RNA5SP88-201ENST00000365560 109 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 SNORD116-23-201ENST00000384645 92 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL6A2P12110 AL133264.1-201ENST00000407157 562 ntBASIC5.7□□□□□ -1.5
COL6A2P12110 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.7□□□□□ -1.5
COL6A2P12110 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 304.3 ms