Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL4A1P02462 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A1P02462 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A1P02462 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A1P02462 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL4A1P02462 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A1P02462 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL4A1P02462 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A1P02462 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A1P02462 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A1P02462 RNA5SP51-201ENST00000364750 119 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 MIR183-201ENST00000384958 110 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A1P02462 AP000907.1-201ENST00000428428 510 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 RPL7P4-203ENST00000430239 730 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A1P02462 AC018635.1-201ENST00000468292 1030 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 UBE2CP3-201ENST00000502715 450 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 AC104619.4-201ENST00000510773 249 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.83□□□□□ -1.64
COL4A1P02462 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A1P02462 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A1P02462 AP005264.7-201ENST00000625003 745 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 U6.105-201ENST00000637379 88 ntBASIC4.83□□□□□ -1.64
COL4A1P02462 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
COL4A1P02462 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
COL4A1P02462 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A1P02462 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.82□□□□□ -1.64
COL4A1P02462 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A1P02462 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A1P02462 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A1P02462 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
COL4A1P02462 RNU1-15P-201ENST00000353977 144 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 RNA5SP372-201ENST00000390836 115 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
COL4A1P02462 SNORA57.3-201ENST00000411095 141 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.82□□□□□ -1.64
COL4A1P02462 MAPRE1P3-201ENST00000435438 796 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A1P02462 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.82□□□□□ -1.64
COL4A1P02462 GEMIN8P3-201ENST00000445417 720 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.82□□□□□ -1.64
COL4A1P02462 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A1P02462 AC006499.5-201ENST00000505037 514 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 AP000619.3-201ENST00000535634 1127 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
COL4A1P02462 AC007179.3-201ENST00000604976 235 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 AP001642.1-201ENST00000624727 2117 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 AL034408.1-202ENST00000636088 415 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 AC119674.1-207ENST00000641355 633 ntBASIC4.82□□□□□ -1.64
COL4A1P02462 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A1P02462 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A1P02462 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A1P02462 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL4A1P02462 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A1P02462 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A1P02462 Z95327.2-201ENST00000414579 1873 ntBASIC4.81□□□□□ -1.64
COL4A1P02462 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A1P02462 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A1P02462 DMD-211ENST00000378707 7410 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A1P02462 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A1P02462 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A1P02462 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.81□□□□□ -1.64
COL4A1P02462 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
COL4A1P02462 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A1P02462 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A1P02462 MFSD8-236ENST00000641509 4050 ntBASIC4.81□□□□□ -1.64
COL4A1P02462 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL4A1P02462 Y_RNA.333-201ENST00000365274 102 ntBASIC4.81□□□□□ -1.64
COL4A1P02462 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A1P02462 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.81□□□□□ -1.64
COL4A1P02462 CYCSP53-201ENST00000455540 265 ntBASIC4.81□□□□□ -1.64
COL4A1P02462 AC006499.6-201ENST00000511169 607 ntBASIC4.81□□□□□ -1.64
COL4A1P02462 RNA5SP208-201ENST00000516156 78 ntBASIC4.81□□□□□ -1.64
COL4A1P02462 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.81□□□□□ -1.64
COL4A1P02462 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A1P02462 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.81□□□□□ -1.64
COL4A1P02462 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A1P02462 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.81□□□□□ -1.64
COL4A1P02462 MIR7702-201ENST00000621931 59 ntBASIC4.81□□□□□ -1.64
COL4A1P02462 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A1P02462 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A1P02462 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A1P02462 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A1P02462 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A1P02462 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A1P02462 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
COL4A1P02462 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A1P02462 SNORA11C-201ENST00000408532 129 ntBASIC4.8□□□□□ -1.64
COL4A1P02462 AC245052.5-201ENST00000416320 649 ntBASIC4.8□□□□□ -1.64
COL4A1P02462 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.8□□□□□ -1.64
COL4A1P02462 AL133162.1-201ENST00000463228 453 ntBASIC4.8□□□□□ -1.64
COL4A1P02462 AC012158.1-204ENST00000483430 465 ntBASIC4.8□□□□□ -1.64
COL4A1P02462 DSTNP2-201ENST00000504533 515 ntBASIC4.8□□□□□ -1.64
COL4A1P02462 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.8□□□□□ -1.64
COL4A1P02462 SNORA74D-201ENST00000516404 141 ntBASIC4.8□□□□□ -1.64
COL4A1P02462 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.8□□□□□ -1.64
COL4A1P02462 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms