Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TNFP01375 LINC01355-201ENST00000566551 5444 ntBASIC4.05□□□□□ -1.76
TNFP01375 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFP01375 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFP01375 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.05□□□□□ -1.76
TNFP01375 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
TNFP01375 AC233289.1-201ENST00000403700 508 ntBASIC4.05□□□□□ -1.76
TNFP01375 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.05□□□□□ -1.76
TNFP01375 TPT1P2-201ENST00000413105 503 ntBASIC4.05□□□□□ -1.76
TNFP01375 RAB9AP4-201ENST00000415230 609 ntBASIC4.05□□□□□ -1.76
TNFP01375 RPS23P10-201ENST00000416185 486 ntBASIC4.05□□□□□ -1.76
TNFP01375 RPL23AP89-201ENST00000439324 255 ntBASIC4.05□□□□□ -1.76
TNFP01375 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TNFP01375 AL359073.1-201ENST00000448036 403 ntBASIC4.05□□□□□ -1.76
TNFP01375 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFP01375 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFP01375 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFP01375 RPL21P6-201ENST00000479171 504 ntBASIC4.05□□□□□ -1.76
TNFP01375 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFP01375 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.05□□□□□ -1.76
TNFP01375 MIR1254-2-201ENST00000579553 63 ntBASIC4.05□□□□□ -1.76
TNFP01375 AC053481.4-201ENST00000583164 216 ntBASIC4.05□□□□□ -1.76
TNFP01375 AL008729.2-201ENST00000606393 473 ntBASIC4.05□□□□□ -1.76
TNFP01375 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFP01375 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFP01375 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TNFP01375 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFP01375 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFP01375 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFP01375 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFP01375 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFP01375 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TNFP01375 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
TNFP01375 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFP01375 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFP01375 AC067945.1-201ENST00000342609 618 ntBASIC4.04□□□□□ -1.76
TNFP01375 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFP01375 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFP01375 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFP01375 RN7SKP27-201ENST00000410684 333 ntBASIC4.04□□□□□ -1.76
TNFP01375 HSPE1P12-201ENST00000412576 301 ntBASIC4.04□□□□□ -1.76
TNFP01375 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.04□□□□□ -1.76
TNFP01375 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFP01375 OR5BE1P-201ENST00000425977 939 ntBASIC4.04□□□□□ -1.76
TNFP01375 ARL4AP3-201ENST00000441452 574 ntBASIC4.04□□□□□ -1.76
TNFP01375 RPS4XP4-201ENST00000443195 763 ntBASIC4.04□□□□□ -1.76
TNFP01375 AC239367.2-201ENST00000447309 705 ntBASIC4.04□□□□□ -1.76
TNFP01375 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFP01375 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFP01375 AC110792.1-201ENST00000491826 472 ntBASIC4.04□□□□□ -1.76
TNFP01375 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
TNFP01375 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFP01375 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFP01375 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.04□□□□□ -1.76
TNFP01375 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFP01375 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFP01375 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFP01375 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFP01375 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.04□□□□□ -1.76
TNFP01375 AL606490.9-201ENST00000603331 271 ntBASIC4.04□□□□□ -1.76
TNFP01375 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFP01375 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFP01375 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.04□□□□□ -1.76
TNFP01375 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
TNFP01375 OR5BE1P-202ENST00000641168 1176 ntBASIC4.04□□□□□ -1.76
TNFP01375 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TNFP01375 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TNFP01375 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFP01375 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFP01375 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TNFP01375 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFP01375 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFP01375 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFP01375 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFP01375 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFP01375 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
TNFP01375 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFP01375 AC000123.3-201ENST00000624029 4975 ntBASIC4.03□□□□□ -1.76
TNFP01375 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TNFP01375 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TNFP01375 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFP01375 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TNFP01375 AL607077.1-201ENST00000401718 499 ntBASIC4.03□□□□□ -1.76
TNFP01375 RNU4-6P-201ENST00000410804 122 ntBASIC4.03□□□□□ -1.76
TNFP01375 RPL36AP36-201ENST00000418616 301 ntBASIC4.03□□□□□ -1.76
TNFP01375 AC004448.2-201ENST00000422360 586 ntBASIC4.03□□□□□ -1.76
TNFP01375 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFP01375 TMX2P1-201ENST00000436507 708 ntBASIC4.03□□□□□ -1.76
TNFP01375 AL606490.8-201ENST00000441624 319 ntBASIC4.03□□□□□ -1.76
TNFP01375 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFP01375 RPL36AP13-201ENST00000457490 317 ntBASIC4.03□□□□□ -1.76
TNFP01375 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.03□□□□□ -1.76
TNFP01375 AC092691.2-201ENST00000461787 803 ntBASIC4.03□□□□□ -1.76
TNFP01375 AC007537.2-201ENST00000472093 511 ntBASIC4.03□□□□□ -1.76
TNFP01375 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
TNFP01375 RPL29P14-201ENST00000495837 428 ntBASIC4.03□□□□□ -1.76
TNFP01375 FTH1P21-201ENST00000512179 511 ntBASIC4.03□□□□□ -1.76
TNFP01375 RNA5SP360-201ENST00000516555 118 ntBASIC4.03□□□□□ -1.76
TNFP01375 IFITM8P-201ENST00000522529 394 ntBASIC4.03□□□□□ -1.76
TNFP01375 AC100770.1-201ENST00000532310 322 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms