Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 Y_RNA.80-201ENST00000362996 102 ntBASIC7.61□□□□□ -1.19
RNF40O75150 RNU6-238P-201ENST00000363313 106 ntBASIC7.61□□□□□ -1.19
RNF40O75150 RN7SKP36-201ENST00000363997 312 ntBASIC7.61□□□□□ -1.19
RNF40O75150 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 RNU6-1013P-201ENST00000384180 107 ntBASIC7.61□□□□□ -1.19
RNF40O75150 RNU1-149P-201ENST00000390870 161 ntBASIC7.61□□□□□ -1.19
RNF40O75150 RNA5SP105-201ENST00000391123 113 ntBASIC7.61□□□□□ -1.19
RNF40O75150 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
RNF40O75150 HMGB1P17-201ENST00000403495 628 ntBASIC7.61□□□□□ -1.19
RNF40O75150 RNU6-954P-201ENST00000411355 107 ntBASIC7.61□□□□□ -1.19
RNF40O75150 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF40O75150 AL356968.1-201ENST00000416622 474 ntBASIC7.61□□□□□ -1.19
RNF40O75150 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF40O75150 AC007283.2-201ENST00000424739 197 ntBASIC7.61□□□□□ -1.19
RNF40O75150 ANXA2P2-201ENST00000435128 1020 ntBASIC7.61□□□□□ -1.19
RNF40O75150 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF40O75150 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF40O75150 RPL31P44-201ENST00000447680 377 ntBASIC7.61□□□□□ -1.19
RNF40O75150 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF40O75150 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF40O75150 RPL30P15-201ENST00000457129 321 ntBASIC7.61□□□□□ -1.19
RNF40O75150 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF40O75150 AC117394.1-201ENST00000477323 567 ntBASIC7.61□□□□□ -1.19
RNF40O75150 RPL22P13-201ENST00000493291 347 ntBASIC7.61□□□□□ -1.19
RNF40O75150 AL035404.1-201ENST00000497982 568 ntBASIC7.61□□□□□ -1.19
RNF40O75150 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF40O75150 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF40O75150 AC087854.1-201ENST00000519706 414 ntBASIC7.61□□□□□ -1.19
RNF40O75150 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF40O75150 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF40O75150 MIR548Y-201ENST00000582739 110 ntBASIC7.61□□□□□ -1.19
RNF40O75150 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF40O75150 AC005518.2-201ENST00000603254 282 ntBASIC7.61□□□□□ -1.19
RNF40O75150 AC018690.1-201ENST00000608144 626 ntBASIC7.61□□□□□ -1.19
RNF40O75150 AC018926.3-201ENST00000618841 406 ntBASIC7.61□□□□□ -1.19
RNF40O75150 U2.1-201ENST00000618978 145 ntBASIC7.61□□□□□ -1.19
RNF40O75150 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
RNF40O75150 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF40O75150 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF40O75150 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF40O75150 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF40O75150 HDAC1P1-201ENST00000455482 1445 ntBASIC7.61□□□□□ -1.19
RNF40O75150 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF40O75150 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF40O75150 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF40O75150 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.6□□□□□ -1.19
RNF40O75150 AC097504.1-201ENST00000515103 2415 ntBASIC7.6□□□□□ -1.19
RNF40O75150 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 AL512353.3-201ENST00000417517 1326 ntBASIC7.6□□□□□ -1.19
RNF40O75150 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF40O75150 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RNF40O75150 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF40O75150 RNU4-81P-201ENST00000363561 144 ntBASIC7.6□□□□□ -1.19
RNF40O75150 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF40O75150 RNU6-38P-201ENST00000384085 107 ntBASIC7.6□□□□□ -1.19
RNF40O75150 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RNF40O75150 AC078974.1-201ENST00000411597 223 ntBASIC7.6□□□□□ -1.19
RNF40O75150 RPL6P29-201ENST00000414863 865 ntBASIC7.6□□□□□ -1.19
RNF40O75150 GSTA6P-201ENST00000424144 582 ntBASIC7.6□□□□□ -1.19
RNF40O75150 AKR1B10P1-201ENST00000425765 942 ntBASIC7.6□□□□□ -1.19
RNF40O75150 RPL7P4-203ENST00000430239 730 ntBASIC7.6□□□□□ -1.19
RNF40O75150 AC013403.1-201ENST00000436954 263 ntBASIC7.6□□□□□ -1.19
RNF40O75150 AC093166.3-201ENST00000448785 303 ntBASIC7.6□□□□□ -1.19
RNF40O75150 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF40O75150 AC009244.1-201ENST00000450566 258 ntBASIC7.6□□□□□ -1.19
RNF40O75150 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.6□□□□□ -1.19
RNF40O75150 PRPF38AP1-201ENST00000451976 933 ntBASIC7.6□□□□□ -1.19
RNF40O75150 RNU6-333P-201ENST00000459117 107 ntBASIC7.6□□□□□ -1.19
RNF40O75150 RPL5P30-201ENST00000465511 891 ntBASIC7.6□□□□□ -1.19
RNF40O75150 RPL12P20-201ENST00000475538 479 ntBASIC7.6□□□□□ -1.19
RNF40O75150 RPL21P99-201ENST00000480369 423 ntBASIC7.6□□□□□ -1.19
RNF40O75150 RN7SL332P-201ENST00000482163 254 ntBASIC7.6□□□□□ -1.19
RNF40O75150 AC015911.1-201ENST00000495111 156 ntBASIC7.6□□□□□ -1.19
RNF40O75150 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 AC091849.1-201ENST00000509920 121 ntBASIC7.6□□□□□ -1.19
RNF40O75150 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF40O75150 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF40O75150 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF40O75150 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.6□□□□□ -1.19
RNF40O75150 AC107952.1-201ENST00000524200 376 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms