Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC079168.2-201ENST00000453977 416 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.25□□□□□ -1.73
HCN1O60741 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.25□□□□□ -1.73
HCN1O60741 AC090142.1-201ENST00000465776 462 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.25□□□□□ -1.73
HCN1O60741 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.25□□□□□ -1.73
HCN1O60741 RNU6-491P-201ENST00000516099 110 ntBASIC4.25□□□□□ -1.73
HCN1O60741 RNA5SP154-201ENST00000516193 111 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.25□□□□□ -1.73
HCN1O60741 IGHV3-63-201ENST00000518422 341 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.25□□□□□ -1.73
HCN1O60741 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.25□□□□□ -1.73
HCN1O60741 OR4V1P-201ENST00000525394 1140 ntBASIC4.25□□□□□ -1.73
HCN1O60741 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.25□□□□□ -1.73
HCN1O60741 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.25□□□□□ -1.73
HCN1O60741 AC100770.1-201ENST00000532310 322 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AC074029.2-201ENST00000551045 634 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.25□□□□□ -1.73
HCN1O60741 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.25□□□□□ -1.73
HCN1O60741 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.25□□□□□ -1.73
HCN1O60741 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.25□□□□□ -1.73
HCN1O60741 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.25□□□□□ -1.73
HCN1O60741 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.25□□□□□ -1.73
HCN1O60741 AC084373.1-201ENST00000603311 235 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AC093765.1-201ENST00000603758 881 ntBASIC4.25□□□□□ -1.73
HCN1O60741 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.25□□□□□ -1.73
HCN1O60741 AC073137.1-201ENST00000605636 634 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AC008966.2-201ENST00000606157 453 ntBASIC4.25□□□□□ -1.73
HCN1O60741 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HCN1O60741 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.25□□□□□ -1.73
HCN1O60741 AC019080.5-201ENST00000624891 757 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AC092159.4-201ENST00000624944 550 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.25□□□□□ -1.73
HCN1O60741 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HCN1O60741 AC068254.2-201ENST00000623938 3577 ntBASIC4.25□□□□□ -1.73
HCN1O60741 AL132640.2-201ENST00000559968 1698 ntBASIC4.25□□□□□ -1.73
HCN1O60741 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
HCN1O60741 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.25□□□□□ -1.73
HCN1O60741 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HCN1O60741 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HCN1O60741 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HCN1O60741 OR56B2P-202ENST00000641377 2453 ntBASIC4.24□□□□□ -1.73
HCN1O60741 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.24□□□□□ -1.73
HCN1O60741 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HCN1O60741 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HCN1O60741 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCN1O60741 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HCN1O60741 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.24□□□□□ -1.73
HCN1O60741 AL592148.3-201ENST00000608771 2646 ntBASIC4.24□□□□□ -1.73
HCN1O60741 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCN1O60741 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HCN1O60741 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCN1O60741 MIR129-1-201ENST00000384972 72 ntBASIC4.24□□□□□ -1.73
HCN1O60741 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
HCN1O60741 RNF19BPX-201ENST00000426224 625 ntBASIC4.24□□□□□ -1.73
HCN1O60741 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCN1O60741 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.24□□□□□ -1.73
HCN1O60741 ARL2BPP10-201ENST00000446487 531 ntBASIC4.24□□□□□ -1.73
HCN1O60741 VN1R48P-201ENST00000448149 1036 ntBASIC4.24□□□□□ -1.73
HCN1O60741 CYCSP42-201ENST00000450823 238 ntBASIC4.24□□□□□ -1.73
HCN1O60741 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.24□□□□□ -1.73
HCN1O60741 OR52A4P-201ENST00000472867 958 ntBASIC4.24□□□□□ -1.73
HCN1O60741 AC012158.1-204ENST00000483430 465 ntBASIC4.24□□□□□ -1.73
HCN1O60741 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.24□□□□□ -1.73
HCN1O60741 AC025445.1-201ENST00000502728 300 ntBASIC4.24□□□□□ -1.73
HCN1O60741 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HCN1O60741 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.24□□□□□ -1.73
HCN1O60741 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.24□□□□□ -1.73
HCN1O60741 C1GALT1P3-201ENST00000522049 819 ntBASIC4.24□□□□□ -1.73
HCN1O60741 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.24□□□□□ -1.73
HCN1O60741 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.24□□□□□ -1.73
HCN1O60741 AC209154.1-201ENST00000582156 337 ntBASIC4.24□□□□□ -1.73
HCN1O60741 PSMA6P4-201ENST00000603247 718 ntBASIC4.24□□□□□ -1.73
HCN1O60741 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.24□□□□□ -1.73
HCN1O60741 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.24□□□□□ -1.73
HCN1O60741 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.24□□□□□ -1.73
HCN1O60741 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HCN1O60741 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.24□□□□□ -1.73
HCN1O60741 AL592437.2-201ENST00000421655 2434 ntBASIC4.24□□□□□ -1.73
HCN1O60741 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HCN1O60741 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HCN1O60741 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.24□□□□□ -1.73
HCN1O60741 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCN1O60741 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HCN1O60741 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HCN1O60741 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.23□□□□□ -1.73
HCN1O60741 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.23□□□□□ -1.73
HCN1O60741 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCN1O60741 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCN1O60741 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
HCN1O60741 RAB28P1-201ENST00000411517 641 ntBASIC4.23□□□□□ -1.73
HCN1O60741 GSTM3P2-201ENST00000412746 530 ntBASIC4.23□□□□□ -1.73
HCN1O60741 AL590806.1-201ENST00000415818 853 ntBASIC4.23□□□□□ -1.73
HCN1O60741 RPL21P43-201ENST00000425440 472 ntBASIC4.23□□□□□ -1.73
HCN1O60741 CENPIP1-201ENST00000425713 902 ntBASIC4.23□□□□□ -1.73
HCN1O60741 RPL23AP1-201ENST00000428990 471 ntBASIC4.23□□□□□ -1.73
HCN1O60741 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.23□□□□□ -1.73
HCN1O60741 AC007563.3-201ENST00000433233 371 ntBASIC4.23□□□□□ -1.73
HCN1O60741 MRPS33P4-201ENST00000434892 317 ntBASIC4.23□□□□□ -1.73
HCN1O60741 ELOCP3-201ENST00000439303 348 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms