Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.33□□□□□ -1.72
LSM1O15116 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.33□□□□□ -1.72
LSM1O15116 AC068020.1-201ENST00000594215 661 ntBASIC4.33□□□□□ -1.72
LSM1O15116 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.33□□□□□ -1.72
LSM1O15116 AC005021.1-201ENST00000608730 355 ntBASIC4.33□□□□□ -1.72
LSM1O15116 AP000894.4-201ENST00000610185 483 ntBASIC4.33□□□□□ -1.72
LSM1O15116 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.33□□□□□ -1.72
LSM1O15116 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
LSM1O15116 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.33□□□□□ -1.72
LSM1O15116 A2MP1-204ENST00000566278 4130 ntBASIC4.33□□□□□ -1.72
LSM1O15116 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LSM1O15116 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
LSM1O15116 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LSM1O15116 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.32□□□□□ -1.72
LSM1O15116 RARSP1-201ENST00000542842 1418 ntBASIC4.32□□□□□ -1.72
LSM1O15116 AC010928.1-201ENST00000592477 1447 ntBASIC4.32□□□□□ -1.72
LSM1O15116 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LSM1O15116 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LSM1O15116 XIAPP3-201ENST00000312918 795 ntBASIC4.32□□□□□ -1.72
LSM1O15116 RNA5SP307-201ENST00000362863 116 ntBASIC4.32□□□□□ -1.72
LSM1O15116 RNU6-304P-201ENST00000364855 107 ntBASIC4.32□□□□□ -1.72
LSM1O15116 SDHCP2-201ENST00000398565 501 ntBASIC4.32□□□□□ -1.72
LSM1O15116 ZNF603P-201ENST00000405613 487 ntBASIC4.32□□□□□ -1.72
LSM1O15116 SNORA74C-2-201ENST00000411179 201 ntBASIC4.32□□□□□ -1.72
LSM1O15116 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.32□□□□□ -1.72
LSM1O15116 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.32□□□□□ -1.72
LSM1O15116 AL138785.1-201ENST00000425821 331 ntBASIC4.32□□□□□ -1.72
LSM1O15116 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.32□□□□□ -1.72
LSM1O15116 YWHAZP2-201ENST00000440317 728 ntBASIC4.32□□□□□ -1.72
LSM1O15116 TXNP2-201ENST00000443918 295 ntBASIC4.32□□□□□ -1.72
LSM1O15116 DDX39BP2-208ENST00000453923 258 ntBASIC4.32□□□□□ -1.72
LSM1O15116 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.32□□□□□ -1.72
LSM1O15116 AP000926.1-201ENST00000479573 241 ntBASIC4.32□□□□□ -1.72
LSM1O15116 AC004453.1-201ENST00000487895 408 ntBASIC4.32□□□□□ -1.72
LSM1O15116 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.32□□□□□ -1.72
LSM1O15116 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.32□□□□□ -1.72
LSM1O15116 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
LSM1O15116 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.32□□□□□ -1.72
LSM1O15116 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.32□□□□□ -1.72
LSM1O15116 AC008676.3-201ENST00000521237 435 ntBASIC4.32□□□□□ -1.72
LSM1O15116 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.32□□□□□ -1.72
LSM1O15116 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.32□□□□□ -1.72
LSM1O15116 TOMM20P2-201ENST00000540082 421 ntBASIC4.32□□□□□ -1.72
LSM1O15116 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.32□□□□□ -1.72
LSM1O15116 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.32□□□□□ -1.72
LSM1O15116 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.32□□□□□ -1.72
LSM1O15116 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.32□□□□□ -1.72
LSM1O15116 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.32□□□□□ -1.72
LSM1O15116 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.32□□□□□ -1.72
LSM1O15116 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.32□□□□□ -1.72
LSM1O15116 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.32□□□□□ -1.72
LSM1O15116 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.32□□□□□ -1.72
LSM1O15116 AL138721.1-201ENST00000616756 179 ntBASIC4.32□□□□□ -1.72
LSM1O15116 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.32□□□□□ -1.72
LSM1O15116 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.32□□□□□ -1.72
LSM1O15116 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.32□□□□□ -1.72
LSM1O15116 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LSM1O15116 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LSM1O15116 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.32□□□□□ -1.72
LSM1O15116 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LSM1O15116 AC010300.1-201ENST00000600671 5134 ntBASIC4.32□□□□□ -1.72
LSM1O15116 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LSM1O15116 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.32□□□□□ -1.72
LSM1O15116 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
LSM1O15116 SDAD1P1-202ENST00000524156 2051 ntBASIC4.31□□□□□ -1.72
LSM1O15116 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 AC067945.1-201ENST00000342609 618 ntBASIC4.31□□□□□ -1.72
LSM1O15116 SNORA62.2-201ENST00000364672 152 ntBASIC4.31□□□□□ -1.72
LSM1O15116 MIR323B-201ENST00000385269 82 ntBASIC4.31□□□□□ -1.72
LSM1O15116 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LSM1O15116 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.31□□□□□ -1.72
LSM1O15116 ST13P16-201ENST00000401760 781 ntBASIC4.31□□□□□ -1.72
LSM1O15116 OR1F12-201ENST00000402365 945 ntBASIC4.31□□□□□ -1.72
LSM1O15116 SPTLC1P2-201ENST00000407089 121 ntBASIC4.31□□□□□ -1.72
LSM1O15116 VN1R8P-201ENST00000407739 893 ntBASIC4.31□□□□□ -1.72
LSM1O15116 RPL7P53-201ENST00000421245 739 ntBASIC4.31□□□□□ -1.72
LSM1O15116 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.31□□□□□ -1.72
LSM1O15116 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
LSM1O15116 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.31□□□□□ -1.72
LSM1O15116 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.31□□□□□ -1.72
LSM1O15116 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.31□□□□□ -1.72
LSM1O15116 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.31□□□□□ -1.72
LSM1O15116 AC074386.1-201ENST00000476560 767 ntBASIC4.31□□□□□ -1.72
LSM1O15116 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
LSM1O15116 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.31□□□□□ -1.72
LSM1O15116 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.31□□□□□ -1.72
LSM1O15116 MIR2114-201ENST00000516645 80 ntBASIC4.31□□□□□ -1.72
LSM1O15116 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.31□□□□□ -1.72
LSM1O15116 OR5M2P-201ENST00000529003 936 ntBASIC4.31□□□□□ -1.72
LSM1O15116 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LSM1O15116 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.31□□□□□ -1.72
LSM1O15116 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
LSM1O15116 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.31□□□□□ -1.72
LSM1O15116 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms