Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC010300.1-201ENST00000600671 5134 ntBASIC7.23□□□□□ -1.25
CUX2O14529 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CUX2O14529 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CUX2O14529 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CUX2O14529 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CUX2O14529 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CUX2O14529 AL359922.3-201ENST00000624779 1670 ntBASIC7.22□□□□□ -1.25
CUX2O14529 RNU1-63P-201ENST00000383902 164 ntBASIC7.22□□□□□ -1.25
CUX2O14529 FCF1P5-201ENST00000406490 482 ntBASIC7.22□□□□□ -1.25
CUX2O14529 CBX1P3-201ENST00000413296 527 ntBASIC7.22□□□□□ -1.25
CUX2O14529 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.22□□□□□ -1.25
CUX2O14529 RNU6-352P-201ENST00000516908 107 ntBASIC7.22□□□□□ -1.25
CUX2O14529 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.22□□□□□ -1.25
CUX2O14529 CYCSP30-201ENST00000546447 172 ntBASIC7.22□□□□□ -1.25
CUX2O14529 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.22□□□□□ -1.25
CUX2O14529 MIR3922-201ENST00000585192 84 ntBASIC7.22□□□□□ -1.25
CUX2O14529 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CUX2O14529 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CUX2O14529 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CUX2O14529 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CUX2O14529 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC7.22□□□□□ -1.25
CUX2O14529 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC7.22□□□□□ -1.25
CUX2O14529 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CUX2O14529 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
CUX2O14529 USP8P1-201ENST00000494673 3183 ntBASIC7.21□□□□□ -1.25
CUX2O14529 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CUX2O14529 AL442128.2-201ENST00000620246 1824 ntBASIC7.21□□□□□ -1.26
CUX2O14529 EI24P3-201ENST00000399046 1062 ntBASIC7.21□□□□□ -1.26
CUX2O14529 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC7.21□□□□□ -1.26
CUX2O14529 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.21□□□□□ -1.26
CUX2O14529 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC7.21□□□□□ -1.26
CUX2O14529 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CUX2O14529 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.21□□□□□ -1.26
CUX2O14529 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC7.21□□□□□ -1.26
CUX2O14529 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC7.21□□□□□ -1.26
CUX2O14529 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.21□□□□□ -1.26
CUX2O14529 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC7.21□□□□□ -1.26
CUX2O14529 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC7.21□□□□□ -1.26
CUX2O14529 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC7.21□□□□□ -1.26
CUX2O14529 AL713922.2-201ENST00000619384 716 ntBASIC7.21□□□□□ -1.26
CUX2O14529 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CUX2O14529 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CUX2O14529 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
CUX2O14529 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CUX2O14529 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CUX2O14529 CDY3P-201ENST00000454543 1618 ntBASIC7.2□□□□□ -1.26
CUX2O14529 ERCC6-202ENST00000374127 1782 ntBASIC7.2□□□□□ -1.26
CUX2O14529 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.2□□□□□ -1.26
CUX2O14529 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC7.2□□□□□ -1.26
CUX2O14529 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CUX2O14529 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.2□□□□□ -1.26
CUX2O14529 SNORA74C-2-201ENST00000411179 201 ntBASIC7.2□□□□□ -1.26
CUX2O14529 MTCO1P45-201ENST00000431457 267 ntBASIC7.2□□□□□ -1.26
CUX2O14529 RPEP2-201ENST00000432149 701 ntBASIC7.2□□□□□ -1.26
CUX2O14529 HSPD1P21-201ENST00000436541 245 ntBASIC7.2□□□□□ -1.26
CUX2O14529 CFL2-206ENST00000556161 546 ntTSL 4 BASIC7.2□□□□□ -1.26
CUX2O14529 AC002069.2-201ENST00000603580 883 ntBASIC7.2□□□□□ -1.26
CUX2O14529 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CUX2O14529 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.2□□□□□ -1.26
CUX2O14529 AL731532.2-201ENST00000623542 1953 ntBASIC7.2□□□□□ -1.26
CUX2O14529 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CUX2O14529 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CUX2O14529 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CUX2O14529 AL391219.1-201ENST00000422570 483 ntBASIC7.19□□□□□ -1.26
CUX2O14529 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.19□□□□□ -1.26
CUX2O14529 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC7.19□□□□□ -1.26
CUX2O14529 RNA5SP497-201ENST00000516081 97 ntBASIC7.19□□□□□ -1.26
CUX2O14529 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.19□□□□□ -1.26
CUX2O14529 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC7.19□□□□□ -1.26
CUX2O14529 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUX2O14529 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUX2O14529 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUX2O14529 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CUX2O14529 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CUX2O14529 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CUX2O14529 MIR30B-201ENST00000384850 88 ntBASIC7.18□□□□□ -1.26
CUX2O14529 RPS20P14-201ENST00000412545 360 ntBASIC7.18□□□□□ -1.26
CUX2O14529 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC7.18□□□□□ -1.26
CUX2O14529 RPL21P91-201ENST00000429231 479 ntBASIC7.18□□□□□ -1.26
CUX2O14529 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.18□□□□□ -1.26
CUX2O14529 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUX2O14529 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUX2O14529 AC106707.2-201ENST00000484182 374 ntBASIC7.18□□□□□ -1.26
CUX2O14529 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUX2O14529 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC7.18□□□□□ -1.26
CUX2O14529 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.18□□□□□ -1.26
CUX2O14529 AC099654.11-201ENST00000638857 294 ntBASIC7.18□□□□□ -1.26
CUX2O14529 AC119674.1-212ENST00000641155 993 ntBASIC7.18□□□□□ -1.26
CUX2O14529 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC7.18□□□□□ -1.26
CUX2O14529 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CUX2O14529 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.18□□□□□ -1.26
CUX2O14529 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
CUX2O14529 AL137918.1-201ENST00000624542 1922 ntBASIC7.18□□□□□ -1.26
CUX2O14529 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC7.18□□□□□ -1.26
CUX2O14529 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.18□□□□□ -1.26
CUX2O14529 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.18□□□□□ -1.26
CUX2O14529 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC7.18□□□□□ -1.26
CUX2O14529 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.18□□□□□ -1.26
CUX2O14529 RNU1-20P-201ENST00000363314 162 ntBASIC7.17□□□□□ -1.26
CUX2O14529 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms