Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC242843.1-201ENST00000618702 573 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AP006248.3-201ENST00000623580 594 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 OR2L1P-202ENST00000641567 1023 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC28A1O00337 SDAD1P1-202ENST00000524156 2051 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
SLC28A1O00337 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC28A1O00337 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 NXPH1-205ENST00000602349 1953 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AC010300.1-201ENST00000600671 5134 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC28A1O00337 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SLC28A1O00337 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 RNA5SP28-201ENST00000363841 119 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 RNU1-63P-201ENST00000383902 164 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 SNORA51.8-201ENST00000384234 132 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 SDHCP2-201ENST00000398565 501 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 AL590290.1-201ENST00000405336 380 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 AP000357.1-201ENST00000409926 1165 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 RNA5SP146-201ENST00000410743 123 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 EIF4A1P3-201ENST00000411521 244 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 UBTFL3-201ENST00000418934 1024 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AL121882.1-201ENST00000422893 417 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AL590762.3-201ENST00000436372 640 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 AC005154.2-201ENST00000438110 379 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 RPS27P5-201ENST00000444247 244 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 GEMIN8P3-201ENST00000445417 720 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC28A1O00337 RPS27AP15-201ENST00000447672 466 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 MTND2P8-201ENST00000450555 1025 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC28A1O00337 OR2AF1P-201ENST00000454899 889 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 AC026348.1-201ENST00000462549 1053 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 AC092905.1-201ENST00000467527 949 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 UBTFL6-201ENST00000477929 1024 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 AC008897.1-201ENST00000494006 347 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC28A1O00337 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
SLC28A1O00337 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AC010285.3-201ENST00000511668 676 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 AC007016.1-201ENST00000512110 244 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC28A1O00337 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC28A1O00337 POLR2KP1-201ENST00000553226 168 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.38□□□□□ -1.71
SLC28A1O00337 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SLC28A1O00337 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AL355816.1-201ENST00000607951 118 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC28A1O00337 U6.48-201ENST00000618523 106 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 MIR6853-201ENST00000619642 74 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC28A1O00337 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC28A1O00337 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.38□□□□□ -1.71
SLC28A1O00337 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC28A1O00337 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC28A1O00337 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC28A1O00337 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC28A1O00337 AL118496.1-201ENST00000440201 1812 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 KARSP3-201ENST00000571212 1504 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
SLC28A1O00337 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SLC28A1O00337 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC28A1O00337 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SLC28A1O00337 RNU6-650P-201ENST00000365658 111 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC28A1O00337 AL121834.1-202ENST00000404494 277 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 AL078604.1-201ENST00000404609 466 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 RN7SKP216-201ENST00000411050 312 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 RN7SKP100-201ENST00000411258 284 ntBASIC4.37□□□□□ -1.71
SLC28A1O00337 RAD23BP1-201ENST00000421404 1227 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms