Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC096741.1-201ENST00000472250 846 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 RBBP4P1-201ENST00000502424 1276 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC004069.2-201ENST00000505438 1114 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 ARL2BPP6-201ENST00000512757 439 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 BMPR1APS2-201ENST00000527904 1012 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 OR7E128P-201ENST00000532736 1024 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AP004242.1-201ENST00000533701 349 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC134349.2-201ENST00000535136 910 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 TRAV8-5-201ENST00000537369 341 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC079905.1-201ENST00000549280 475 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 GNRHR2P1-201ENST00000555315 631 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC002310.3-201ENST00000569728 723 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 CCDC58P1-201ENST00000578567 430 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 EIF4A2P1-201ENST00000587313 1063 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC069307.1-201ENST00000602820 447 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 FO393422.1-201ENST00000603908 708 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AL078624.2-201ENST00000605063 554 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC107294.3-201ENST00000609211 526 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC006946.3-201ENST00000609791 756 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 AC099654.2-201ENST00000433031 1980 ntBASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHKB-CPT1BH3BT56 CASC19-284ENST00000642142 1868 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC132825.1-201ENST00000463573 2247 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 RNA5SP273-201ENST00000362484 113 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 RNU1-150P-201ENST00000362491 162 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 RNU4-7P-201ENST00000364758 141 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 RNA5SP455-201ENST00000365190 119 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 DYNLT3P1-201ENST00000378574 347 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 RNA5SP122-201ENST00000384457 108 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 RNU1-77P-201ENST00000390868 162 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 RN7SKP267-201ENST00000410381 285 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 SNORA74C-2-201ENST00000411179 201 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 GABARAPL3-201ENST00000412799 354 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC114755.2-201ENST00000413520 361 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 MTND4LP21-201ENST00000415303 295 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 EIF1P3-201ENST00000423841 334 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 CLCN3P1-201ENST00000423965 1017 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 MTCO3P21-201ENST00000430791 643 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC011742.1-201ENST00000431448 434 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 RPSAP32-201ENST00000432681 526 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 ACTR3P2-201ENST00000439585 1257 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 TRIM60P18-201ENST00000441518 828 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC234781.3-201ENST00000452540 973 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC079168.2-201ENST00000453977 416 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 RPL6P9-201ENST00000466502 859 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 OR52A4P-201ENST00000472867 958 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 HPRT1P2-201ENST00000505250 544 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC023141.12-201ENST00000512399 199 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 MTCO1P49-201ENST00000523429 802 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AL139174.1-201ENST00000531489 886 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 GNG2-208ENST00000554875 430 ntTSL 5 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC121758.1-202ENST00000556917 658 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 BPIFA4P-203ENST00000603168 689 ntBASIC2.26□□□□□ -2.05
CHKB-CPT1BH3BT56 AL161729.3-201ENST00000603533 673 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms