Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TCRBV7S3A2A0A539 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 FABP7P1-201ENST00000424004 391 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 RPL12P11-201ENST00000439970 501 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 RNA5SP464-201ENST00000516251 108 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 RNA5SP92-201ENST00000516437 110 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC004825.1-201ENST00000555068 586 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC093591.2-201ENST00000565254 3843 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC006116.3-201ENST00000592968 361 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 EIF1P6-201ENST00000600054 334 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AL020997.3-201ENST00000602843 359 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC006363.1-201ENST00000603806 463 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC090525.3-201ENST00000605601 189 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC016877.3-201ENST00000606778 504 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC092954.1-201ENST00000609121 445 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 VN1R74P-201ENST00000613259 503 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AP003485.2-201ENST00000623636 610 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 LINC02211-204ENST00000642024 1070 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AL445487.1-201ENST00000415694 1580 ntBASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.9□□□□□ -1.63
TCRBV7S3A2A0A539 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 RBPJP2-201ENST00000618187 1444 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 U8.4-201ENST00000363626 134 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 RNY3P9-201ENST00000384727 106 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 SNORD96B-201ENST00000386148 79 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 Z75741.2-201ENST00000417272 1167 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC010099.3-201ENST00000423896 409 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 CDY14P-201ENST00000431260 1014 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 RPS17P8-201ENST00000434525 335 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AP000936.3-201ENST00000438127 255 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 CDY12P-201ENST00000440679 1015 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC009263.1-201ENST00000441193 1239 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 CDY13P-201ENST00000445813 1015 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 CDY23P-201ENST00000451661 1014 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AL133244.1-201ENST00000456007 258 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 RPL23AP37-201ENST00000479658 549 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC069528.1-202ENST00000482888 637 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC073358.1-201ENST00000505671 684 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 snoZ278.1-201ENST00000517059 112 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC125612.1-201ENST00000547580 377 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC061975.8-201ENST00000587058 721 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 PCNAP1-202ENST00000595299 752 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 BNIP3P4-201ENST00000604946 565 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC013470.4-201ENST00000619978 986 ntBASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TCRBV7S3A2A0A539 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms