Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RNU6-819P-201ENST00000364116 107 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 Z98745.1-201ENST00000402553 494 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 RPL23AP48-201ENST00000406913 488 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 MTND4P11-201ENST00000417020 1058 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AL031663.1-201ENST00000437445 219 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AC133473.1-201ENST00000455173 299 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 RN7SL41P-201ENST00000476144 297 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AC093270.2-201ENST00000486157 792 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 SNORA70.17-201ENST00000516449 133 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 RN7SKP82-201ENST00000516786 223 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 IGKV2D-10-201ENST00000520194 281 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 IGLV3-26-201ENST00000520756 302 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AC084033.1-201ENST00000550830 633 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 PCNPP1-201ENST00000552501 511 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AL110118.1-201ENST00000553543 400 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 MIR4436B2-201ENST00000581415 91 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 MIR4436B1-201ENST00000583272 91 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 MIR4737-201ENST00000583979 81 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AC008966.2-201ENST00000606157 453 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 AC023509.5-201ENST00000617434 807 ntBASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.96□□□□□ -1.77
RHBDD3Q9Y3P4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
RHBDD3Q9Y3P4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AL590240.1-201ENST00000334118 313 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 RNA5SP502-201ENST00000362694 119 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 RNU4-31P-201ENST00000384211 141 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 RNU6-31P-201ENST00000384388 108 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 SKP1P3-201ENST00000429280 487 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 CBX1P4-201ENST00000439415 457 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 RPL12P3-201ENST00000440080 396 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 Z99127.2-201ENST00000441426 334 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC073648.4-201ENST00000442655 781 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AL935212.3-201ENST00000450729 284 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 ISCUP1-201ENST00000454451 448 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC104763.1-201ENST00000475274 360 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 RPL32P9-201ENST00000487963 407 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 HMGB1P21-201ENST00000502313 581 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 OR7H2P-201ENST00000513483 306 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 HIGD1AP18-201ENST00000520730 278 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC106785.3-201ENST00000564064 847 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 UBE2FP2-201ENST00000566646 462 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC091042.1-201ENST00000579213 173 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC091178.1-203ENST00000584586 279 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC073091.2-201ENST00000603205 907 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC083899.3-201ENST00000603413 594 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC098935.2-201ENST00000604222 466 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 CR392039.4-201ENST00000624968 501 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 U3.53-201ENST00000628922 216 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 AC138393.1-206ENST00000540997 1886 ntBASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RHBDD3Q9Y3P4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 AC010928.1-201ENST00000592477 1447 ntBASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 CCT8P1-201ENST00000413611 1657 ntBASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 AC108467.2-201ENST00000617640 1597 ntBASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 RNU1-108P-201ENST00000362556 161 ntBASIC3.95□□□□□ -1.78
RHBDD3Q9Y3P4 RNU4-23P-201ENST00000362839 140 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms