Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC008837.1-201ENST00000511513 412 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 PHBP14-201ENST00000512887 367 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 EIF4A2P3-201ENST00000525903 1055 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AP000873.5-201ENST00000533906 236 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC092747.2-201ENST00000545069 983 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 NRBF2P5-201ENST00000603087 788 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 MAPK10-303ENST00000641324 3959 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC080128.1-201ENST00000474389 1917 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 S100A11P2-201ENST00000467589 312 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC026784.1-201ENST00000507986 352 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 MIR4435-1-201ENST00000582552 80 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC005046.1-201ENST00000608515 625 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC005344.1-201ENST00000613391 459 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC099063.3-201ENST00000642066 185 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AL137058.3-201ENST00000624531 3099 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 SNX18P3-202ENST00000565670 1750 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC130650.2-201ENST00000618736 2403 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 BX323014.1-201ENST00000412876 237 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 TRGV5P-201ENST00000419915 354 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC011611.1-201ENST00000552179 197 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC067852.5-201ENST00000589299 310 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC025175.1-201ENST00000606482 759 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 SNORA3.3-201ENST00000408712 125 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC008264.1-201ENST00000447612 367 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC011825.1-201ENST00000484967 388 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 TOMM20P4-201ENST00000427861 435 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC005002.1-201ENST00000447458 540 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 ATP1B1P1-201ENST00000509767 915 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 RNU6-548P-201ENST00000517083 115 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MACF1Q9UPN3 AC124068.1-201ENST00000563131 678 ntBASIC1.68□□□□□ -2.14
MACF1Q9UPN3 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
MACF1Q9UPN3 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
MACF1Q9UPN3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
MACF1Q9UPN3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC1.67□□□□□ -2.14
MACF1Q9UPN3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
MACF1Q9UPN3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC1.67□□□□□ -2.14
MACF1Q9UPN3 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
MACF1Q9UPN3 RNA5SP197-201ENST00000363357 119 ntBASIC1.67□□□□□ -2.14
MACF1Q9UPN3 BTF3P9-201ENST00000418784 283 ntBASIC1.67□□□□□ -2.14
MACF1Q9UPN3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC1.67□□□□□ -2.14
MACF1Q9UPN3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MACF1Q9UPN3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MACF1Q9UPN3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms