Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 RNA5SP446-201ENST00000515955 82 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 IGHV3-63-201ENST00000518422 341 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 PSMB7P1-201ENST00000556349 514 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 MIR3939-201ENST00000582614 106 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC069366.1-201ENST00000583159 838 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC034236.3-201ENST00000605999 461 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC008966.2-201ENST00000606157 453 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AP000843.1-201ENST00000624880 701 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 AC140479.6-201ENST00000633535 357 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 NXPH1-205ENST00000602349 1953 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLCF1Q9UBD9 LINC01109-201ENST00000603837 3081 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 SPATA2P1-201ENST00000431223 2055 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 HSPA8P17-201ENST00000427029 1382 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 MIR331-201ENST00000362302 94 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 RNA5SP366-201ENST00000365454 123 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 RNA5SP151-201ENST00000365632 117 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 RNU1-63P-201ENST00000383902 164 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 SNORA11F-201ENST00000408237 128 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AC062016.2-201ENST00000420950 676 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AL606490.7-201ENST00000433136 191 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 MRPS33P4-201ENST00000434892 317 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AC108751.2-201ENST00000469993 231 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 RNU6-760P-201ENST00000516078 97 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 TRAV8-5-201ENST00000537369 341 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AC090515.3-201ENST00000560431 315 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AC021483.2-201ENST00000567415 758 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 MIMT1-201ENST00000597105 1050 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AC103792.1-201ENST00000603591 919 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AP004372.1-201ENST00000604842 844 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 AC016717.3-201ENST00000624730 554 ntBASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCF1Q9UBD9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AP001273.1-201ENST00000624493 3152 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 RPL23AP26-201ENST00000412728 464 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 OR6K4P-201ENST00000423179 955 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC092017.2-201ENST00000427600 362 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC022022.1-201ENST00000430304 178 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 RPL23AP52-201ENST00000439311 478 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 UBE2V1P3-201ENST00000439651 417 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 VN1R32P-201ENST00000452234 905 ntBASIC3.92□□□□□ -1.78
CLCF1Q9UBD9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms