Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AP004372.1-201ENST00000604842 844 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC034229.4-201ENST00000607861 441 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC018926.1-201ENST00000616335 435 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AC015722.2-201ENST00000622210 551 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AL596275.2-204ENST00000641628 552 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 AL596275.2-206ENST00000641957 626 ntBASIC4.69□□□□□ -1.66
SIX2Q9NPC8 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX2Q9NPC8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 MIR331-201ENST00000362302 94 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 RN7SKP103-201ENST00000363848 320 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 SNORA72.3-201ENST00000365074 132 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 SNORD65-201ENST00000391079 73 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 MTND4P11-201ENST00000417020 1058 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 DYNLL1P7-201ENST00000429273 258 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 HLA-N-201ENST00000437516 135 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AL645638.1-201ENST00000440519 361 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 RPL7P33-201ENST00000444159 742 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AL627224.1-201ENST00000448334 444 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 RPL7AP10-201ENST00000481016 791 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AC104164.2-201ENST00000496953 495 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 TPT1P8-201ENST00000510120 555 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 RFPL4AP3-201ENST00000515267 345 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AC063949.1-201ENST00000552900 865 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AL031666.3-201ENST00000609320 1006 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AC005156.1-201ENST00000613371 573 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 AC068880.4-201ENST00000623082 495 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 OR5AC4P-202ENST00000642086 985 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 MTCO1P4-201ENST00000520516 1409 ntBASIC4.68□□□□□ -1.66
SIX2Q9NPC8 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX2Q9NPC8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AC103591.2-201ENST00000265259 766 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 OR5P1P-201ENST00000299512 925 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 RNA5SP332-201ENST00000391063 115 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 MTATP6P14-201ENST00000455189 673 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AC108145.1-201ENST00000503770 153 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AC021087.2-201ENST00000504656 1203 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 C1DP5-201ENST00000525775 383 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 GLRXP2-201ENST00000555594 321 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AC067838.1-201ENST00000606064 577 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AC005021.1-201ENST00000608730 355 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 MIR8084-201ENST00000614105 89 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AL021997.2-201ENST00000615674 271 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 AP005019.3-201ENST00000620418 560 ntBASIC4.67□□□□□ -1.66
SIX2Q9NPC8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SIX2Q9NPC8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms