Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 SNORD66.1-201ENST00000391230 76 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 SNORA11-201ENST00000408789 128 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 RN7SKP182-201ENST00000410772 298 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC098592.2-201ENST00000413158 265 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 RPL17P36-201ENST00000420302 549 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 RCC2P2-201ENST00000422174 918 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 EIF1P3-201ENST00000423841 334 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 YY1P1-201ENST00000427625 668 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC099522.1-202ENST00000514718 367 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 MIR2116-201ENST00000517221 80 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC105233.3-201ENST00000531125 744 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC006064.5-201ENST00000541782 248 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 MIR6867-201ENST00000610636 67 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 EOGT-210ENST00000615922 1931 ntBASIC4.61□□□□□ -1.67
NXF3Q9H4D5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NXF3Q9H4D5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 RNA5SP130-201ENST00000364431 114 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 EIF4A1P3-201ENST00000411521 244 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 VDAC1P9-201ENST00000412766 841 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AL356095.1-201ENST00000417217 199 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 OR6C71P-201ENST00000432580 913 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 HSPE1P22-201ENST00000456856 327 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AF213884.1-201ENST00000488102 463 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AC090151.1-201ENST00000520784 730 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AC107918.3-201ENST00000533272 382 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AL020997.2-201ENST00000602607 184 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AC024941.1-201ENST00000612250 334 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 AC140113.4-201ENST00000622087 222 ntBASIC4.6□□□□□ -1.67
NXF3Q9H4D5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.6□□□□□ -1.67
NXF3Q9H4D5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 VDAC1P6-201ENST00000430062 855 ntBASIC4.59□□□□□ -1.67
NXF3Q9H4D5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 RPS29P19-201ENST00000479709 171 ntBASIC4.59□□□□□ -1.67
NXF3Q9H4D5 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 AC104164.2-201ENST00000496953 495 ntBASIC4.59□□□□□ -1.67
NXF3Q9H4D5 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.59□□□□□ -1.67
NXF3Q9H4D5 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 BNIP3P5-201ENST00000562290 498 ntBASIC4.59□□□□□ -1.67
NXF3Q9H4D5 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 AC005332.5-201ENST00000591222 2919 ntBASIC4.59□□□□□ -1.67
NXF3Q9H4D5 AC104118.1-201ENST00000607625 1589 ntBASIC4.59□□□□□ -1.67
NXF3Q9H4D5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NXF3Q9H4D5 LINC01355-201ENST00000566551 5444 ntBASIC4.59□□□□□ -1.68
NXF3Q9H4D5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
NXF3Q9H4D5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
NXF3Q9H4D5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms