Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 IGBP1P4-201ENST00000503202 879 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 WBP1LP4-201ENST00000505043 344 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC073358.1-201ENST00000505671 684 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC109445.1-201ENST00000512356 383 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 snoU109.6-201ENST00000516831 118 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC087808.1-201ENST00000520501 361 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 OR8G3P-201ENST00000533406 921 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AL356057.1-201ENST00000533798 831 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC135279.1-201ENST00000543493 504 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 ELOCP32-201ENST00000548625 324 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AP000769.2-201ENST00000602344 396 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AL390838.2-201ENST00000602394 274 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC009220.3-201ENST00000604318 586 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AL158042.1-201ENST00000605338 460 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC084782.3-201ENST00000612282 578 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC126175.1-201ENST00000617041 758 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC135068.5-201ENST00000624197 983 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 RN7SKP124-201ENST00000364730 341 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 OR1L6-202ENST00000373684 1044 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 DBIP1-201ENST00000401435 260 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AL450992.3-201ENST00000413192 568 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 RPS29P14-201ENST00000431518 171 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 ATP5F1P1-201ENST00000433775 569 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 MTND5P2-201ENST00000442927 1142 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 RNU6-1218P-201ENST00000458990 108 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 RPL7P6-201ENST00000480903 738 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC048346.1-201ENST00000510247 144 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC127024.5-201ENST00000580085 462 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 PIGPP4-201ENST00000584447 307 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AL137072.1-201ENST00000603444 466 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC006363.1-201ENST00000603806 463 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AL390816.3-201ENST00000604527 1066 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC121247.2-201ENST00000604776 136 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC023158.2-201ENST00000614876 543 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AP000776.1-201ENST00000530032 1663 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC022031.1-201ENST00000585985 2593 ntBASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM54Q9BYV2 AC005539.1-201ENST00000443768 1479 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms