Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 CDC27P2-201ENST00000425026 1922 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 OR5H2-201ENST00000355273 945 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 RNU6-207P-201ENST00000384137 107 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 Y_RNA.505-201ENST00000384489 102 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 Z86062.1-201ENST00000406773 777 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 SNORA79B-201ENST00000410557 148 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 RN7SKP97-201ENST00000410966 333 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AL591848.1-201ENST00000413092 322 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 VN1R31P-201ENST00000417498 730 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AC140479.3-201ENST00000418944 1126 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 OSTCP5-201ENST00000425293 453 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 RPL21P43-201ENST00000425440 472 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 MTND1P20-201ENST00000430341 950 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 CYCSP20-201ENST00000473154 315 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 RPL23AP37-201ENST00000479658 549 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 BET1P1-201ENST00000482276 359 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AC091544.1-201ENST00000484702 348 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 OR5H3P-201ENST00000502817 919 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 RNA5SP464-201ENST00000516251 108 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 ZNF321P-202ENST00000550843 495 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AC009094.1-201ENST00000564443 426 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AC119751.7-201ENST00000600494 245 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AL158042.1-201ENST00000605338 460 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AC099785.1-201ENST00000605697 437 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 MIR6853-201ENST00000619642 74 ntBASIC5.73□□□□□ -1.49
SALL3Q9BXA9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.73□□□□□ -1.49
SALL3Q9BXA9 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AL138820.1-201ENST00000617901 5305 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 NOL8P1-201ENST00000508336 3529 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 RAD1P1-201ENST00000231383 813 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 RNU6-1331P-201ENST00000363658 106 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 RNVU1-6-201ENST00000364688 164 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AL080315.1-201ENST00000406055 466 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AL031779.1-201ENST00000415663 330 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 HMGB1P49-201ENST00000418882 569 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 ARAFP1-201ENST00000422172 605 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 OR1H1P-201ENST00000448731 937 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 RPL21P18-201ENST00000469899 480 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 MTCO1P31-201ENST00000506355 492 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 HMGB1P46-201ENST00000520062 610 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 LRRC6P1-201ENST00000532188 885 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 EDDM3DP-201ENST00000554692 434 ntBASIC5.72□□□□□ -1.49
SALL3Q9BXA9 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.72□□□□□ -1.49
SALL3Q9BXA9 RN7SL690P-201ENST00000582087 240 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms