Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MTCO1P43-201ENST00000431831 488 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AC090018.1-201ENST00000434369 367 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 CLUHP1-201ENST00000435012 1190 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.21□□□□□ -1.74
SSX3Q99909 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 AC092647.3-201ENST00000443044 633 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 YWHAQP9-201ENST00000445891 512 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 CYCSP20-201ENST00000473154 315 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.21□□□□□ -1.74
SSX3Q99909 AC093270.2-201ENST00000486157 792 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AC073073.1-201ENST00000493920 463 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AC010374.1-201ENST00000503762 1237 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 NDUFA5P12-201ENST00000503796 343 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 AC021146.3-201ENST00000511911 260 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 RNU2-30P-201ENST00000516209 141 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.21□□□□□ -1.74
SSX3Q99909 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 SOX5P1-201ENST00000524155 1127 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 PTP4A1P6-201ENST00000531034 478 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.21□□□□□ -1.74
SSX3Q99909 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 AC090079.2-201ENST00000575289 768 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 RN7SL708P-201ENST00000580952 299 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AP001180.3-201ENST00000582221 145 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AC010680.4-201ENST00000605334 543 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AC026741.1-201ENST00000605892 482 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AC006946.3-201ENST00000609791 756 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX3Q99909 AC090510.2-201ENST00000617465 629 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 MIR6839-201ENST00000620425 113 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX3Q99909 AC006249.1-201ENST00000621223 471 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.21□□□□□ -1.74
SSX3Q99909 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.21□□□□□ -1.74
SSX3Q99909 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 DHX9P1-201ENST00000436565 3076 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 RNA5SP502-201ENST00000362694 119 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 U3.3-201ENST00000362986 216 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 RNA5SP90-201ENST00000364801 99 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 RNU1-106P-201ENST00000384382 164 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 GLULP6-201ENST00000399502 913 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 AL589647.1-201ENST00000402485 466 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 HMGB3P18-201ENST00000406327 590 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX3Q99909 FTH1P6-201ENST00000430768 320 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX3Q99909 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX3Q99909 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 AL935212.3-201ENST00000450729 284 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.2□□□□□ -1.74
SSX3Q99909 DNAJB5P1-201ENST00000454004 806 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 AC096992.1-201ENST00000459808 709 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 RPL32P14-201ENST00000463196 378 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 TRBV8-2-201ENST00000475637 270 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 S100A11P1-201ENST00000477525 312 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 RPL21P47-201ENST00000483696 477 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 RN7SL97P-201ENST00000486780 299 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 RPS6P4-201ENST00000494693 758 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 HMGB1P21-201ENST00000502313 581 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 OR5H3P-201ENST00000502817 919 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 STMN1P2-201ENST00000508435 439 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 AC121161.1-201ENST00000510606 652 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSX3Q99909 AC105031.1-201ENST00000518550 476 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 HMGB1P23-201ENST00000518743 568 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX3Q99909 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX3Q99909 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX3Q99909 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX3Q99909 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.2□□□□□ -1.74
SSX3Q99909 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.2□□□□□ -1.74
SSX3Q99909 AC022884.2-201ENST00000578535 580 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.2□□□□□ -1.74
SSX3Q99909 AC011447.4-201ENST00000587562 111 ntBASIC4.2□□□□□ -1.74
SSX3Q99909 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms