Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC009229.4-201ENST00000623854 1947 ntBASIC6.77□□□□□ -1.33
IFT140Q96RY7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
IFT140Q96RY7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.77□□□□□ -1.33
IFT140Q96RY7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
IFT140Q96RY7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
IFT140Q96RY7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
IFT140Q96RY7 AC104623.2-202ENST00000623477 4002 ntBASIC6.76□□□□□ -1.33
IFT140Q96RY7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
IFT140Q96RY7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.76□□□□□ -1.33
IFT140Q96RY7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.76□□□□□ -1.33
IFT140Q96RY7 AL358472.1-201ENST00000431295 329 ntBASIC6.76□□□□□ -1.33
IFT140Q96RY7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC6.76□□□□□ -1.33
IFT140Q96RY7 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
IFT140Q96RY7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.76□□□□□ -1.33
IFT140Q96RY7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.76□□□□□ -1.33
IFT140Q96RY7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
IFT140Q96RY7 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
IFT140Q96RY7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
IFT140Q96RY7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
IFT140Q96RY7 ZNF833P-201ENST00000424938 1494 ntBASIC6.75□□□□□ -1.33
IFT140Q96RY7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
IFT140Q96RY7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
IFT140Q96RY7 ZNF402P-201ENST00000404435 3100 ntBASIC6.75□□□□□ -1.33
IFT140Q96RY7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.75□□□□□ -1.33
IFT140Q96RY7 AL592291.1-201ENST00000403830 352 ntBASIC6.75□□□□□ -1.33
IFT140Q96RY7 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.75□□□□□ -1.33
IFT140Q96RY7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
IFT140Q96RY7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.75□□□□□ -1.33
IFT140Q96RY7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.75□□□□□ -1.33
IFT140Q96RY7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC6.75□□□□□ -1.33
IFT140Q96RY7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
IFT140Q96RY7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
IFT140Q96RY7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
IFT140Q96RY7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
IFT140Q96RY7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.75□□□□□ -1.33
IFT140Q96RY7 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
IFT140Q96RY7 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
IFT140Q96RY7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
IFT140Q96RY7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
IFT140Q96RY7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
IFT140Q96RY7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
IFT140Q96RY7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.74□□□□□ -1.33
IFT140Q96RY7 SNORD66.1-201ENST00000391230 76 ntBASIC6.74□□□□□ -1.33
IFT140Q96RY7 AL158156.1-201ENST00000422509 473 ntBASIC6.74□□□□□ -1.33
IFT140Q96RY7 CYCSP53-201ENST00000455540 265 ntBASIC6.74□□□□□ -1.33
IFT140Q96RY7 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.74□□□□□ -1.33
IFT140Q96RY7 RPL29P14-201ENST00000495837 428 ntBASIC6.74□□□□□ -1.33
IFT140Q96RY7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.74□□□□□ -1.33
IFT140Q96RY7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
IFT140Q96RY7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
IFT140Q96RY7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
IFT140Q96RY7 RNU1-44P-201ENST00000384453 163 ntBASIC6.73□□□□□ -1.33
IFT140Q96RY7 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
IFT140Q96RY7 AC108145.1-201ENST00000503770 153 ntBASIC6.73□□□□□ -1.33
IFT140Q96RY7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.73□□□□□ -1.33
IFT140Q96RY7 MIR3124-201ENST00000582636 67 ntBASIC6.73□□□□□ -1.33
IFT140Q96RY7 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
IFT140Q96RY7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
IFT140Q96RY7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
IFT140Q96RY7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
IFT140Q96RY7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC6.73□□□□□ -1.33
IFT140Q96RY7 AL078604.1-201ENST00000404609 466 ntBASIC6.73□□□□□ -1.33
IFT140Q96RY7 RN7SKP167-201ENST00000411047 285 ntBASIC6.73□□□□□ -1.33
IFT140Q96RY7 AC009506.2-201ENST00000420635 840 ntBASIC6.73□□□□□ -1.33
IFT140Q96RY7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.73□□□□□ -1.33
IFT140Q96RY7 AC008155.2-201ENST00000464337 397 ntBASIC6.73□□□□□ -1.33
IFT140Q96RY7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.73□□□□□ -1.33
IFT140Q96RY7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
IFT140Q96RY7 MIR4513-201ENST00000581077 86 ntBASIC6.73□□□□□ -1.33
IFT140Q96RY7 AC243654.2-201ENST00000612843 443 ntBASIC6.73□□□□□ -1.33
IFT140Q96RY7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.73□□□□□ -1.33
IFT140Q96RY7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
IFT140Q96RY7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
IFT140Q96RY7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 AC005261.2-201ENST00000593427 4258 ntBASIC6.72□□□□□ -1.33
IFT140Q96RY7 SNORA5.1-201ENST00000384275 131 ntBASIC6.72□□□□□ -1.33
IFT140Q96RY7 SNORD3H-201ENST00000384486 214 ntBASIC6.72□□□□□ -1.33
IFT140Q96RY7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 AL139247.1-201ENST00000422768 325 ntBASIC6.72□□□□□ -1.33
IFT140Q96RY7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 RN7SL601P-201ENST00000471221 293 ntBASIC6.72□□□□□ -1.33
IFT140Q96RY7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 AC024224.1-201ENST00000538284 609 ntBASIC6.72□□□□□ -1.33
IFT140Q96RY7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 AL031666.3-201ENST00000609320 1006 ntBASIC6.72□□□□□ -1.33
IFT140Q96RY7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
IFT140Q96RY7 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
IFT140Q96RY7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.71□□□□□ -1.33
IFT140Q96RY7 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
IFT140Q96RY7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC6.71□□□□□ -1.33
IFT140Q96RY7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms