Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AC092821.2-201ENST00000545710 2042 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 AL021877.2-201ENST00000624442 10684 ntBASIC7.54□□□□□ -1.2
CCDC85AQ96PX6 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 MTCO1P11-201ENST00000429111 1528 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 RNU4-73P-201ENST00000363164 141 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 RN7SKP292-201ENST00000365522 317 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 RPL23AP29-201ENST00000397284 453 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 FAT1P1-201ENST00000406588 507 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC079355.1-201ENST00000421770 223 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 RPL37P21-201ENST00000435890 276 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 PMCHL2-203ENST00000457791 237 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC092757.1-201ENST00000467293 467 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC074386.1-201ENST00000476560 767 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 RPL7L1P13-201ENST00000511702 739 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 RNY4P37-201ENST00000516225 96 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 RNA5SP135-201ENST00000517019 125 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC112191.2-201ENST00000522428 333 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 IGHV1-14-201ENST00000523391 241 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AF235103.2-201ENST00000525753 346 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 PCNAP4-201ENST00000532690 730 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AK6P1-201ENST00000540219 478 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC125612.1-201ENST00000547580 377 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC125611.2-201ENST00000551907 647 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC020916.2-201ENST00000591242 360 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AL139286.1-201ENST00000604465 483 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC009233.1-201ENST00000616477 371 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 AC234782.5-201ENST00000617723 324 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 MIR1321-201ENST00000637766 79 ntBASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC85AQ96PX6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
CCDC85AQ96PX6 RBPJP7-201ENST00000442803 1447 ntBASIC7.52□□□□□ -1.2
CCDC85AQ96PX6 RBPJP5-201ENST00000449433 1447 ntBASIC7.52□□□□□ -1.2
CCDC85AQ96PX6 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CCDC85AQ96PX6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.52□□□□□ -1.2
CCDC85AQ96PX6 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CCDC85AQ96PX6 AC096921.2-201ENST00000561507 1916 ntBASIC7.52□□□□□ -1.2
CCDC85AQ96PX6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.52□□□□□ -1.2
CCDC85AQ96PX6 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 AL117339.4-201ENST00000608335 7063 ntBASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 DBF4P1-201ENST00000412976 1892 ntBASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 OR10R3P-201ENST00000361688 942 ntBASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 RNU6-462P-201ENST00000362659 105 ntBASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 Y_RNA.356-201ENST00000365475 113 ntBASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 Y_RNA.460-201ENST00000384255 102 ntBASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 RPS24P12-201ENST00000402084 394 ntBASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 AL356776.1-201ENST00000406574 447 ntBASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 RNU4-55P-201ENST00000410731 137 ntBASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC85AQ96PX6 AL451136.1-201ENST00000435399 325 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms