Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNGAP1Q96PV0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNGAP1Q96PV0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
SYNGAP1Q96PV0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SYNGAP1Q96PV0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNGAP1Q96PV0 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNGAP1Q96PV0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNGAP1Q96PV0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 SNX18P3-202ENST00000565670 1750 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC079753.1-201ENST00000623243 3868 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 RN7SKP226-201ENST00000364912 300 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 RNU6-876P-201ENST00000391295 104 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 RPS3AP23-201ENST00000401762 784 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 MIR1277-201ENST00000408536 78 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 RNU6-575P-201ENST00000411326 105 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 RPL23AP39-201ENST00000415533 405 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 RNGTTP1-201ENST00000420965 728 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC009480.2-201ENST00000422916 432 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AL512286.1-201ENST00000439244 400 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 RAB11AP1-201ENST00000442978 646 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC009220.1-201ENST00000451614 275 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 PSAT1P4-201ENST00000466500 526 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 SLC25A51P1-201ENST00000468432 871 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AL355032.1-201ENST00000472981 438 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC108120.2-201ENST00000512973 294 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 MIR1269B-201ENST00000580405 75 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 MIR4260-201ENST00000583107 67 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC098614.4-201ENST00000607601 462 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC006338.1-201ENST00000618453 749 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 RPL23AP61-201ENST00000623642 466 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 DCAF13P3-201ENST00000561147 1334 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 AC005224.3-201ENST00000584683 2140 ntBASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SYNGAP1Q96PV0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 MTND5P17-201ENST00000418405 1603 ntBASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 CDY11P-201ENST00000447168 1651 ntBASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SYNGAP1Q96PV0 Y_RNA.302-201ENST00000364997 102 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 SNORD65.1-201ENST00000390889 71 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 RNU6-244P-201ENST00000391028 104 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 MYL6P5-201ENST00000412707 459 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC092647.1-201ENST00000420654 287 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 CYP4F29P-201ENST00000420685 446 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 RPS12P17-201ENST00000438591 377 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 RPS26P30-201ENST00000443431 335 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 RPL5P24-201ENST00000463742 885 ntBASIC6.65□□□□□ -1.35
SYNGAP1Q96PV0 KLF3P2-201ENST00000465138 268 ntBASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms