Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC139769.3-201ENST00000618383 175 ntBASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.24□□□□□ -1.41
SMC1BQ8NDV3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 Y_RNA.169-201ENST00000363745 96 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 RNU6-413P-201ENST00000384115 107 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC104297.1-201ENST00000393779 870 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 RNU4-25P-201ENST00000410569 230 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AL008629.1-201ENST00000438615 184 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 NPM1P33-201ENST00000438918 872 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 PRDX3P4-201ENST00000470828 747 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC113347.3-201ENST00000509113 148 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC109464.1-201ENST00000511091 819 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC083923.1-201ENST00000523708 376 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 MTCO1P47-201ENST00000523889 1271 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 MED28P5-201ENST00000528254 438 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC008083.2-201ENST00000546707 476 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 DUXAP6-201ENST00000553858 601 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC106785.1-201ENST00000565935 262 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 MIR548Y-201ENST00000582739 110 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 VN1R83P-201ENST00000595685 445 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC025857.2-201ENST00000602711 238 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AL353778.1-201ENST00000603149 408 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 DPRXP5-201ENST00000604662 539 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC100847.1-201ENST00000611316 481 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AC131159.1-201ENST00000621854 213 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 AL512506.2-201ENST00000624472 458 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 MIR3974-201ENST00000637126 96 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 MIR1322-201ENST00000638013 71 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 DHX40P1-201ENST00000588725 1412 ntBASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SMC1BQ8NDV3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC144833.1-201ENST00000567953 4089 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 OR4K15-201ENST00000305051 1216 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 RNU6-543P-201ENST00000362576 108 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 RNA5SP191-201ENST00000362585 102 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 RNU6-729P-201ENST00000384399 107 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AL590084.1-201ENST00000407885 387 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 OR4K6P-201ENST00000416478 897 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC004074.1-201ENST00000421810 1063 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 VTI1BP4-201ENST00000427516 527 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC010468.1-201ENST00000461022 817 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC107015.1-201ENST00000466902 747 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC010618.1-201ENST00000469924 477 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 BET1P1-201ENST00000482276 359 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 ATP5LP5-201ENST00000483050 299 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 RPS3AP22-201ENST00000488297 769 ntBASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.22□□□□□ -1.41
SMC1BQ8NDV3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms