Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL513533.1-201ENST00000453728 415 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 RPS17P5-201ENST00000498293 408 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 RNU6-232P-201ENST00000517144 64 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 C1GALT1P3-201ENST00000522049 819 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC022880.1-201ENST00000534017 973 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 OR11H3P-201ENST00000554547 982 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 UBE2FP2-201ENST00000566646 462 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC060780.2-201ENST00000589047 198 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 VN1R83P-201ENST00000595685 445 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC103591.3-201ENST00000608684 209 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 MIR6780A-201ENST00000615089 68 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC135068.5-201ENST00000624197 983 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC092104.1-201ENST00000497346 1441 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AL158152.1-201ENST00000602652 1435 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 KARSP3-201ENST00000571212 1504 ntBASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SLC44A3Q8N4M1 AC104964.3-201ENST00000606115 2860 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 U3.10-201ENST00000364459 214 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 RNA5SP505-201ENST00000364748 108 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 RPL26P37-201ENST00000411983 438 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 BTF3P8-201ENST00000414577 526 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 OR10T1P-201ENST00000424327 947 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 MTCYBP39-201ENST00000437562 491 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 RPS29P10-201ENST00000439197 166 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 RPL34P20-201ENST00000442771 351 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC112498.1-201ENST00000444401 332 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 MTCYBP42-201ENST00000444653 1130 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC009961.3-201ENST00000449832 765 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC104849.1-201ENST00000462623 405 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC107015.1-201ENST00000466902 747 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 RN7SL354P-201ENST00000469282 294 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC104689.1-201ENST00000473356 768 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC109927.2-201ENST00000506416 303 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC116353.3-201ENST00000511215 249 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC119751.1-201ENST00000513357 765 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC087465.1-201ENST00000560574 245 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC010546.1-201ENST00000569391 485 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 BMS1P7-201ENST00000602440 1052 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AP003465.2-201ENST00000602571 373 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC104687.2-201ENST00000604442 342 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC015722.2-201ENST00000622210 551 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AL392088.2-201ENST00000637607 285 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC025263.3-201ENST00000622965 1396 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 AC004076.2-201ENST00000620532 3323 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 ECM1P2-201ENST00000503354 1577 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms