Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 UBTFL9-201ENST00000534504 1148 ntBASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 AC005034.4-201ENST00000603612 899 ntBASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 AC009313.2-201ENST00000417893 1941 ntBASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 AL592494.2-201ENST00000425455 1548 ntBASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 AC011447.7-201ENST00000624228 1590 ntBASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LYSMD4Q5XG99 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 RNU4-31P-201ENST00000384211 141 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 SNORA5.1-201ENST00000384275 131 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 RPS26P8-201ENST00000393490 348 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AL590762.2-201ENST00000395798 571 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 NCSTNP1-201ENST00000406229 144 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC011933.1-201ENST00000413334 321 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 RAD23BP1-201ENST00000421404 1227 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AL158073.1-201ENST00000426848 1104 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 RPS29P17-201ENST00000430795 166 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AL512661.1-201ENST00000434586 1253 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC114755.5-201ENST00000447760 831 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 CLIC4P1-201ENST00000453177 535 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC116533.1-201ENST00000459748 321 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC092902.1-201ENST00000486999 259 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 NPM1P28-201ENST00000492269 840 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC104629.1-201ENST00000494226 508 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC025164.1-201ENST00000496249 478 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 MTCO2P9-201ENST00000503214 694 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 NIFKP7-201ENST00000503365 834 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 MRPL49P2-201ENST00000521066 465 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC008083.2-201ENST00000546707 476 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC022884.3-201ENST00000579571 248 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC079880.2-201ENST00000603790 1213 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC120053.1-201ENST00000607706 736 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AP000240.1-201ENST00000609910 452 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC011472.4-201ENST00000615848 491 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC095038.2-201ENST00000621464 1070 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 AC011815.3-201ENST00000624194 473 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 SOCS5P3-201ENST00000425115 1576 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 BX005019.1-201ENST00000561881 1810 ntBASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LYSMD4Q5XG99 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 AC021146.4-201ENST00000309229 279 ntBASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 RNU1-85P-201ENST00000364127 164 ntBASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 SNORA37-201ENST00000384504 129 ntBASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 MIR23B-201ENST00000384832 97 ntBASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 RPL23AP59-201ENST00000399415 461 ntBASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 AL355143.1-201ENST00000407101 841 ntBASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 AC009302.1-201ENST00000417147 390 ntBASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 MTND2P9-201ENST00000422293 931 ntBASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 MTCO3P21-201ENST00000430791 643 ntBASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 ACTR3P2-201ENST00000439585 1257 ntBASIC4.59□□□□□ -1.67
LYSMD4Q5XG99 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms