Protein–RNA interactions for Protein: Q16656

NRF1, Nuclear respiratory factor 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1Q16656 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.16□□□□□ -1.74
NRF1Q16656 AC108467.2-201ENST00000617640 1597 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NRF1Q16656 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NRF1Q16656 AL590240.1-201ENST00000334118 313 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 RNA5SP505-201ENST00000364748 108 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 SNORA62-201ENST00000365493 153 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 RNA5SP105-201ENST00000391123 113 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 C4BPAP2-201ENST00000428434 478 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 CNOT7P1-201ENST00000429006 852 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 RPEP2-201ENST00000432149 701 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 HMGB3P10-201ENST00000434734 572 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 RSL24D1P2-201ENST00000445584 366 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.16□□□□□ -1.74
NRF1Q16656 RN7SL354P-201ENST00000469282 294 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 AC037198.2-201ENST00000478845 733 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 RPL7AP10-201ENST00000481016 791 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 RN7SL459P-201ENST00000481078 302 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.16□□□□□ -1.74
NRF1Q16656 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.16□□□□□ -1.74
NRF1Q16656 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.16□□□□□ -1.74
NRF1Q16656 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.16□□□□□ -1.74
NRF1Q16656 C1GALT1P3-201ENST00000522049 819 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
NRF1Q16656 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.16□□□□□ -1.74
NRF1Q16656 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.16□□□□□ -1.74
NRF1Q16656 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.16□□□□□ -1.74
NRF1Q16656 AC009268.1-201ENST00000561352 1203 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.16□□□□□ -1.74
NRF1Q16656 MIR5096-201ENST00000583713 70 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.16□□□□□ -1.74
NRF1Q16656 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NRF1Q16656 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.16□□□□□ -1.74
NRF1Q16656 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 AL590410.1-201ENST00000617925 333 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 AC021106.3-201ENST00000623925 531 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.16□□□□□ -1.74
NRF1Q16656 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NRF1Q16656 AC018555.1-201ENST00000567548 1980 ntBASIC4.16□□□□□ -1.74
NRF1Q16656 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.16□□□□□ -1.74
NRF1Q16656 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NRF1Q16656 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NRF1Q16656 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
NRF1Q16656 AC107021.2-201ENST00000567714 2095 ntBASIC4.15□□□□□ -1.74
NRF1Q16656 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
NRF1Q16656 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NRF1Q16656 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
NRF1Q16656 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
NRF1Q16656 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
NRF1Q16656 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.15□□□□□ -1.75
NRF1Q16656 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
NRF1Q16656 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NRF1Q16656 SNORA71.2-201ENST00000364941 134 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NRF1Q16656 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NRF1Q16656 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NRF1Q16656 AC104297.1-201ENST00000393779 870 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
NRF1Q16656 SNORA74C-2-201ENST00000411179 201 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.15□□□□□ -1.75
NRF1Q16656 EIF2S2P3-201ENST00000428356 999 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 YWHAZP2-201ENST00000440317 728 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.15□□□□□ -1.75
NRF1Q16656 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.15□□□□□ -1.75
NRF1Q16656 RAB28P3-201ENST00000448325 597 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 AL591363.1-201ENST00000450091 483 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 ABCF2P2-201ENST00000450549 296 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.15□□□□□ -1.75
NRF1Q16656 RPL10P17-201ENST00000453852 316 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.15□□□□□ -1.75
NRF1Q16656 AL133244.1-201ENST00000456007 258 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 AC010326.1-201ENST00000462726 602 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 RN7SL385P-201ENST00000468873 276 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 CCDC75P1-201ENST00000469247 791 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
NRF1Q16656 AC025554.1-201ENST00000505641 188 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.15□□□□□ -1.75
NRF1Q16656 SNORA48.9-201ENST00000516419 162 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 AF186190.1-201ENST00000517470 480 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.15□□□□□ -1.75
NRF1Q16656 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.15□□□□□ -1.75
NRF1Q16656 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.15□□□□□ -1.75
NRF1Q16656 AC084759.1-201ENST00000561168 290 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 RPL23AP97-201ENST00000568955 471 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 RN7SL690P-201ENST00000582087 240 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.15□□□□□ -1.75
NRF1Q16656 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.15□□□□□ -1.75
NRF1Q16656 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.15□□□□□ -1.75
NRF1Q16656 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.15□□□□□ -1.75
NRF1Q16656 AL356121.2-201ENST00000624715 780 ntBASIC4.15□□□□□ -1.75
NRF1Q16656 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.15□□□□□ -1.75
NRF1Q16656 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NRF1Q16656 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NRF1Q16656 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NRF1Q16656 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.14□□□□□ -1.75
NRF1Q16656 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NRF1Q16656 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms