Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 YWHAZP7-201ENST00000436906 631 ntBASIC4.89□□□□□ -1.63
RAE1P78406 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 USP9YP22-201ENST00000438971 294 ntBASIC4.89□□□□□ -1.63
RAE1P78406 MTND5P2-201ENST00000442927 1142 ntBASIC4.89□□□□□ -1.63
RAE1P78406 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.89□□□□□ -1.63
RAE1P78406 SPRYD7P1-201ENST00000443861 570 ntBASIC4.89□□□□□ -1.63
RAE1P78406 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.89□□□□□ -1.63
RAE1P78406 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.89□□□□□ -1.63
RAE1P78406 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 RPL21P134-201ENST00000453468 483 ntBASIC4.89□□□□□ -1.63
RAE1P78406 RPL7AP52-201ENST00000458096 790 ntBASIC4.89□□□□□ -1.63
RAE1P78406 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.89□□□□□ -1.63
RAE1P78406 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.89□□□□□ -1.63
RAE1P78406 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 GTF2F2P1-201ENST00000511083 675 ntBASIC4.89□□□□□ -1.63
RAE1P78406 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 AP000859.1-201ENST00000525536 307 ntBASIC4.89□□□□□ -1.63
RAE1P78406 OR8A2P-201ENST00000528631 952 ntBASIC4.89□□□□□ -1.63
RAE1P78406 AL358913.1-201ENST00000554342 121 ntBASIC4.89□□□□□ -1.63
RAE1P78406 BPTFP1-201ENST00000579209 492 ntBASIC4.89□□□□□ -1.63
RAE1P78406 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.89□□□□□ -1.63
RAE1P78406 BNIP3P26-201ENST00000600827 554 ntBASIC4.89□□□□□ -1.63
RAE1P78406 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 AC023158.2-201ENST00000614876 543 ntBASIC4.89□□□□□ -1.63
RAE1P78406 AC023509.5-201ENST00000617434 807 ntBASIC4.89□□□□□ -1.63
RAE1P78406 MIR4278-201ENST00000636094 69 ntBASIC4.89□□□□□ -1.63
RAE1P78406 ECM1P2-201ENST00000503354 1577 ntBASIC4.89□□□□□ -1.63
RAE1P78406 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RAE1P78406 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
RAE1P78406 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.89□□□□□ -1.63
RAE1P78406 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.89□□□□□ -1.63
RAE1P78406 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.89□□□□□ -1.63
RAE1P78406 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RAE1P78406 AL049737.1-201ENST00000413920 1403 ntBASIC4.89□□□□□ -1.63
RAE1P78406 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAE1P78406 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.88□□□□□ -1.63
RAE1P78406 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RAE1P78406 AC026523.2-201ENST00000625039 7739 ntBASIC4.88□□□□□ -1.63
RAE1P78406 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAE1P78406 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
RAE1P78406 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.88□□□□□ -1.63
RAE1P78406 AC011493.1-201ENST00000596753 1632 ntBASIC4.88□□□□□ -1.63
RAE1P78406 RN7SKP162-201ENST00000363605 345 ntBASIC4.88□□□□□ -1.63
RAE1P78406 OR52E6-202ENST00000379946 954 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AL512422.1-201ENST00000407033 553 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.88□□□□□ -1.63
RAE1P78406 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.88□□□□□ -1.63
RAE1P78406 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RAE1P78406 DPRXP1-201ENST00000426312 460 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AL139148.1-201ENST00000427122 680 ntBASIC4.88□□□□□ -1.63
RAE1P78406 MGAT2P2-201ENST00000427194 797 ntBASIC4.88□□□□□ -1.63
RAE1P78406 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 MTCO1P54-201ENST00000430139 712 ntBASIC4.88□□□□□ -1.63
RAE1P78406 MTCO3P21-201ENST00000430791 643 ntBASIC4.88□□□□□ -1.63
RAE1P78406 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RAE1P78406 AL391987.1-201ENST00000441025 200 ntBASIC4.88□□□□□ -1.63
RAE1P78406 CYCSP24-201ENST00000445119 316 ntBASIC4.88□□□□□ -1.63
RAE1P78406 YWHAQP9-201ENST00000445891 512 ntBASIC4.88□□□□□ -1.63
RAE1P78406 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 RN7SL174P-201ENST00000475578 289 ntBASIC4.88□□□□□ -1.63
RAE1P78406 RN7SL101P-201ENST00000496350 279 ntBASIC4.88□□□□□ -1.63
RAE1P78406 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 RPL7L1P4-201ENST00000513004 707 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AC008837.2-201ENST00000513076 418 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 AC020937.1-201ENST00000519677 1013 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.88□□□□□ -1.63
RAE1P78406 OR4C2P-201ENST00000530855 1064 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.88□□□□□ -1.63
RAE1P78406 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.88□□□□□ -1.63
RAE1P78406 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 AL031281.1-201ENST00000604049 488 ntBASIC4.88□□□□□ -1.63
RAE1P78406 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.88□□□□□ -1.63
RAE1P78406 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.88□□□□□ -1.63
RAE1P78406 AC074140.1-201ENST00000621617 208 ntBASIC4.88□□□□□ -1.63
RAE1P78406 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.88□□□□□ -1.63
RAE1P78406 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.88□□□□□ -1.63
RAE1P78406 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.88□□□□□ -1.63
RAE1P78406 AL049767.1-202ENST00000637826 242 ntBASIC4.88□□□□□ -1.63
RAE1P78406 CASC19-264ENST00000641912 1184 ntBASIC4.88□□□□□ -1.63
RAE1P78406 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.88□□□□□ -1.63
RAE1P78406 AP005435.3-201ENST00000531260 3198 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms