Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TPM4P67936 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TPM4P67936 AL136131.1-201ENST00000406079 803 ntBASIC4.68□□□□□ -1.66
TPM4P67936 CYP4F29P-201ENST00000420685 446 ntBASIC4.68□□□□□ -1.66
TPM4P67936 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.68□□□□□ -1.66
TPM4P67936 RPL7AP25-201ENST00000423357 805 ntBASIC4.68□□□□□ -1.66
TPM4P67936 MTND4LP13-201ENST00000425022 298 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AL158073.1-201ENST00000426848 1104 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AC087650.1-201ENST00000431445 468 ntBASIC4.68□□□□□ -1.66
TPM4P67936 NFYAP1-201ENST00000431953 972 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AC011998.1-201ENST00000433403 117 ntBASIC4.68□□□□□ -1.66
TPM4P67936 MTND2P2-201ENST00000434633 945 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AF228730.2-201ENST00000438784 848 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AL512326.1-201ENST00000443050 721 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.68□□□□□ -1.66
TPM4P67936 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.68□□□□□ -1.66
TPM4P67936 AC083829.1-201ENST00000503756 657 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.68□□□□□ -1.66
TPM4P67936 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.68□□□□□ -1.66
TPM4P67936 AC021483.2-201ENST00000567415 758 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.68□□□□□ -1.66
TPM4P67936 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.68□□□□□ -1.66
TPM4P67936 AC104662.1-201ENST00000604448 511 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AL713998.2-201ENST00000604538 1198 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AC100847.1-201ENST00000611316 481 ntBASIC4.68□□□□□ -1.66
TPM4P67936 uc_338.13-201ENST00000618243 179 ntBASIC4.68□□□□□ -1.66
TPM4P67936 AC068870.2-201ENST00000620635 389 ntBASIC4.68□□□□□ -1.66
TPM4P67936 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TPM4P67936 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.68□□□□□ -1.66
TPM4P67936 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TPM4P67936 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
TPM4P67936 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TPM4P67936 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.67□□□□□ -1.66
TPM4P67936 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TPM4P67936 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TPM4P67936 AC008033.1-201ENST00000216407 1162 ntBASIC4.67□□□□□ -1.66
TPM4P67936 RNU1-130P-201ENST00000363930 160 ntBASIC4.67□□□□□ -1.66
TPM4P67936 SNORD113.2-201ENST00000364166 89 ntBASIC4.67□□□□□ -1.66
TPM4P67936 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TPM4P67936 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TPM4P67936 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TPM4P67936 AL049697.2-201ENST00000403708 294 ntBASIC4.67□□□□□ -1.66
TPM4P67936 SNORA11F-201ENST00000408237 128 ntBASIC4.67□□□□□ -1.66
TPM4P67936 AC008072.1-201ENST00000434254 824 ntBASIC4.67□□□□□ -1.66
TPM4P67936 RPS20P1-201ENST00000434853 354 ntBASIC4.67□□□□□ -1.66
TPM4P67936 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TPM4P67936 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.67□□□□□ -1.66
TPM4P67936 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.67□□□□□ -1.66
TPM4P67936 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TPM4P67936 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
TPM4P67936 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.67□□□□□ -1.66
TPM4P67936 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.67□□□□□ -1.66
TPM4P67936 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.67□□□□□ -1.66
TPM4P67936 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.67□□□□□ -1.66
TPM4P67936 AC090515.3-201ENST00000560431 315 ntBASIC4.67□□□□□ -1.66
TPM4P67936 AC068020.1-201ENST00000594215 661 ntBASIC4.67□□□□□ -1.66
TPM4P67936 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.67□□□□□ -1.66
TPM4P67936 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.67□□□□□ -1.66
TPM4P67936 AL354984.3-201ENST00000604803 325 ntBASIC4.67□□□□□ -1.66
TPM4P67936 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.67□□□□□ -1.66
TPM4P67936 AC015722.2-201ENST00000622210 551 ntBASIC4.67□□□□□ -1.66
TPM4P67936 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.67□□□□□ -1.66
TPM4P67936 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TPM4P67936 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TPM4P67936 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TPM4P67936 BDP1P-201ENST00000582658 1990 ntBASIC4.67□□□□□ -1.66
TPM4P67936 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TPM4P67936 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TPM4P67936 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TPM4P67936 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.66□□□□□ -1.66
TPM4P67936 OR5P1P-201ENST00000299512 925 ntBASIC4.66□□□□□ -1.66
TPM4P67936 PGBD4P8-201ENST00000412993 562 ntBASIC4.66□□□□□ -1.66
TPM4P67936 AC022022.1-201ENST00000430304 178 ntBASIC4.66□□□□□ -1.66
TPM4P67936 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.66□□□□□ -1.66
TPM4P67936 AC096638.2-201ENST00000434965 711 ntBASIC4.66□□□□□ -1.66
TPM4P67936 RPL23AP46-201ENST00000438548 490 ntBASIC4.66□□□□□ -1.66
TPM4P67936 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.66□□□□□ -1.66
TPM4P67936 AL356535.1-201ENST00000440335 398 ntBASIC4.66□□□□□ -1.66
TPM4P67936 RPL36AP13-201ENST00000457490 317 ntBASIC4.66□□□□□ -1.66
TPM4P67936 AC010326.1-201ENST00000462726 602 ntBASIC4.66□□□□□ -1.66
TPM4P67936 RPL12P20-201ENST00000475538 479 ntBASIC4.66□□□□□ -1.66
TPM4P67936 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.66□□□□□ -1.66
TPM4P67936 AC109458.1-201ENST00000508858 316 ntBASIC4.66□□□□□ -1.66
TPM4P67936 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.66□□□□□ -1.66
TPM4P67936 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.66□□□□□ -1.66
TPM4P67936 AC018552.3-201ENST00000567416 561 ntBASIC4.66□□□□□ -1.66
TPM4P67936 FAM106CP-201ENST00000582212 507 ntBASIC4.66□□□□□ -1.66
TPM4P67936 AC110741.2-201ENST00000605278 268 ntBASIC4.66□□□□□ -1.66
TPM4P67936 AP000255.1-201ENST00000610276 676 ntBASIC4.66□□□□□ -1.66
TPM4P67936 RN7SL722P-201ENST00000617780 284 ntBASIC4.66□□□□□ -1.66
TPM4P67936 RN7SL565P-201ENST00000618246 284 ntBASIC4.66□□□□□ -1.66
TPM4P67936 AC140479.6-201ENST00000633535 357 ntBASIC4.66□□□□□ -1.66
TPM4P67936 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TPM4P67936 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TPM4P67936 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TPM4P67936 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.66□□□□□ -1.66
TPM4P67936 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.65□□□□□ -1.66
TPM4P67936 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
TPM4P67936 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
TPM4P67936 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms