Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC010424.2-201ENST00000607594 443 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AF129408.1-201ENST00000608767 431 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AL512427.1-201ENST00000618593 349 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 AC015804.1-201ENST00000622935 435 ntBASIC5.86□□□□□ -1.47
RHBDL3P58872 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.86□□□□□ -1.47
RHBDL3P58872 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.86□□□□□ -1.47
RHBDL3P58872 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDL3P58872 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDL3P58872 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RHBDL3P58872 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
RHBDL3P58872 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
RHBDL3P58872 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDL3P58872 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDL3P58872 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDL3P58872 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDL3P58872 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RHBDL3P58872 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RHBDL3P58872 RNU6-236P-201ENST00000363886 106 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 AC007618.1-201ENST00000366455 732 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDL3P58872 RPL7P27-201ENST00000403775 720 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 RPS16P5-201ENST00000406501 404 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 VN1R37P-201ENST00000419096 748 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 RPS27AP6-201ENST00000427962 448 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDL3P58872 TPT1P13-201ENST00000449760 499 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 PRPF38AP1-201ENST00000451976 933 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 AC234781.3-201ENST00000452540 973 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 MRPL35P4-201ENST00000453682 566 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 RPS6P2-201ENST00000454208 705 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.85□□□□□ -1.47
RHBDL3P58872 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDL3P58872 RPL7L1P13-201ENST00000511702 739 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 AC108043.1-201ENST00000512696 574 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDL3P58872 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AC139103.1-201ENST00000534696 1030 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AC023825.1-201ENST00000566704 1030 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 AC090312.1-201ENST00000580637 348 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 RN7SL690P-201ENST00000582087 240 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AC104687.2-201ENST00000604442 342 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 AC009948.4-201ENST00000604692 675 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 AC092953.2-201ENST00000608000 699 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AL049794.2-201ENST00000616301 365 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 AC009704.2-201ENST00000618739 483 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDL3P58872 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.85□□□□□ -1.47
RHBDL3P58872 AC013437.2-201ENST00000639587 677 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDL3P58872 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDL3P58872 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDL3P58872 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RHBDL3P58872 HSPD1P14-201ENST00000432666 1618 ntBASIC5.85□□□□□ -1.47
RHBDL3P58872 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 SAGE2P-201ENST00000420011 2126 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RHBDL3P58872 NCLP2-201ENST00000416078 1462 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.84□□□□□ -1.47
RHBDL3P58872 Z98755.1-201ENST00000407015 1384 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RHBDL3P58872 RNU1-87P-201ENST00000363727 170 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 RPS4XP9-201ENST00000405151 780 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 AC119751.6-201ENST00000416712 186 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 BX510359.2-201ENST00000417920 305 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 MTND2P15-201ENST00000418575 892 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.84□□□□□ -1.47
RHBDL3P58872 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.84□□□□□ -1.47
RHBDL3P58872 GEMIN8P3-201ENST00000445417 720 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC010326.1-201ENST00000462726 602 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 CEACAMP10-202ENST00000495431 496 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 FTH1P24-201ENST00000503502 462 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC008885.2-201ENST00000509506 930 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.84□□□□□ -1.47
RHBDL3P58872 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC010376.1-201ENST00000522101 334 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.84□□□□□ -1.47
RHBDL3P58872 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms